Project name: 2510-19.pdb

Status: done

Started: 2026-03-12 01:09:22
Settings
Chain sequence(s) H: QVQLVQSGAEEKKPGASVKVSCKASDYTFTDYNMNWVRQAPGQRLEWMGNIDPYSGGTSYNQKFKGRVTITRDTSASTAYMELSSLRSEDTAVYYCARGHYYGSSYVYAMDYWGQGTTVTVSS
L: DIVMTQSPDSLAVSLGERATISCKSSQSLLYSSNQKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSYPWTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:51)
Show buried residues

Minimal score value
-2.9143
Maximal score value
1.5443
Average score
-0.6133
Total score value
-144.7472

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.8954
2 V H -1.3088
3 Q H -1.5125
4 L H 0.0000
5 V H 0.7850
6 Q H 0.0000
7 S H -0.4764
8 G H -0.5590
9 A H -0.8334
11 E H -1.9016
12 E H -2.7003
13 K H -2.6048
14 K H -2.8344
15 P H -2.3299
16 G H -1.4733
17 A H -1.1734
18 S H -1.3527
19 V H 0.0000
20 K H -2.0689
21 V H 0.0000
22 S H -0.4999
23 C H 0.0000
24 K H -0.6753
25 A H 0.0000
26 S H -1.3633
27 D H -2.3242
28 Y H -1.2264
29 T H -0.7048
30 F H 0.0000
35 T H -0.3072
36 D H -0.6456
37 Y H 0.1139
38 N H -0.1907
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7795
45 A H -1.1221
46 P H -0.9141
47 G H -1.3540
48 Q H -2.0571
49 R H -1.7561
50 L H 0.0000
51 E H -0.9888
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 N H 0.0000
56 I H 0.0000
57 D H -0.6382
58 P H 0.0000
59 Y H 0.4865
62 S H 0.0187
63 G H -0.5456
64 G H -0.5668
65 T H -0.4134
66 S H -0.3258
67 Y H -0.7997
68 N H -1.6785
69 Q H -2.7543
70 K H -2.9069
71 F H 0.0000
72 K H -2.9143
74 G H -1.9485
75 R H -1.6141
76 V H 0.0000
77 T H -0.9217
78 I H 0.0000
79 T H -0.7884
80 R H -0.9208
81 D H -1.0978
82 T H -0.4552
83 S H -0.5401
84 A H -0.6180
85 S H -0.6984
86 T H 0.0000
87 A H 0.0000
88 Y H -0.6826
89 M H 0.0000
90 E H -1.5165
91 L H 0.0000
92 S H -1.1193
93 S H -1.1257
94 L H 0.0000
95 R H -2.7869
96 S H -2.2098
97 E H -2.4637
98 D H 0.0000
99 T H -1.2641
100 A H 0.0000
101 V H 0.2234
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 H H 0.0000
109 Y H 1.3013
110 Y H 1.5443
111 G H 0.5531
111A S H 0.3254
112B S H 0.7041
112A Y H 1.2879
112 V H 1.0528
113 Y H 0.9547
114 A H 0.0000
115 M H 0.0000
116 D H -0.0147
117 Y H -0.0130
118 W H -0.1309
119 G H 0.0000
120 Q H -1.1243
121 G H -0.4905
122 T H 0.0000
123 T H -0.4928
124 V H 0.0000
125 T H -1.6188
126 V H 0.0000
127 S H -1.6106
128 S H -1.1773
1 D L -1.4502
2 I L 0.0000
3 V L 0.7734
4 M L 0.0000
5 T L -0.5215
6 Q L 0.0000
7 S L -1.1150
8 P L -1.2423
9 D L -2.1590
10 S L -1.4470
11 L L -0.6844
12 A L -0.3642
13 V L -0.8821
14 S L -0.9010
15 L L 0.1157
16 G L -1.1582
17 E L -2.6734
18 R L -2.7705
19 A L 0.0000
20 T L -0.5188
21 I L 0.0000
22 S L -0.9387
23 C L 0.0000
24 K L -2.0079
25 S L 0.0000
26 S L -0.9315
27 Q L -1.5210
28 S L -0.8044
29 L L 0.0000
30 L L -0.1786
31 Y L 0.0714
32 S L -0.6338
33 S L -0.7067
34 N L -1.0519
35 Q L -1.6679
36 K L -1.3196
37 N L 0.0000
38 Y L 0.0000
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.7014
45 K L -1.0924
46 P L -0.7692
47 G L -1.2287
48 Q L -1.6125
49 P L -1.0540
50 P L 0.0000
51 K L -0.9029
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1509
56 W L -0.2448
57 A L 0.0000
65 S L -0.6479
66 T L -0.5435
67 R L -1.3421
68 E L -1.0056
69 S L -0.7494
70 G L -0.9211
71 V L -1.0413
72 P L -1.2797
74 D L -2.1744
75 R L -1.5657
76 F L 0.0000
77 S L -0.8850
78 G L -0.4601
79 S L -0.6044
80 G L -1.0638
83 S L -1.1332
84 G L -0.9997
85 T L -1.4908
86 D L -1.9993
87 F L 0.0000
88 T L -0.7273
89 L L 0.0000
90 T L -0.6096
91 I L 0.0000
92 S L -1.8624
93 S L -1.8001
94 L L 0.0000
95 Q L -1.0413
96 A L -0.6020
97 E L -1.8511
98 D L 0.0000
99 V L -0.3855
100 A L 0.0000
101 V L -0.4385
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 Y L 0.5322
109 S L 0.0750
114 Y L 0.5132
115 P L -0.3241
116 W L 0.0000
117 T L 0.0455
118 F L 0.0000
119 G L 0.0000
120 Q L -1.1496
121 G L 0.0000
122 T L 0.0000
123 K L -1.2916
124 V L 0.0000
125 E L -0.6679
126 I L 0.0048
127 K L -1.2432
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Laboratory of Theory of Biopolymers 2018