| Chain sequence(s) |
H: QVQLVQSGAEEKKPGASVKVSCKASDYTFTDYNMNWVRQAPGQRLEWMGNIDPYSGGTSYNQKFKGRVTITRDTSASTAYMELSSLRSEDTAVYYCARGHYYGSSYVYAMDYWGQGTTVTVSS
L: DIVMTQSPDSLAVSLGERATISCKSSQSLLYSSNQKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSYPWTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:49)
[INFO] Main: Simulation completed successfully. (00:02:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.8954 | |
| 2 | V | H | -1.3088 | |
| 3 | Q | H | -1.5125 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7850 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4764 | |
| 8 | G | H | -0.5590 | |
| 9 | A | H | -0.8334 | |
| 11 | E | H | -1.9016 | |
| 12 | E | H | -2.7003 | |
| 13 | K | H | -2.6048 | |
| 14 | K | H | -2.8344 | |
| 15 | P | H | -2.3299 | |
| 16 | G | H | -1.4733 | |
| 17 | A | H | -1.1734 | |
| 18 | S | H | -1.3527 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.0689 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.4999 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.6753 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3633 | |
| 27 | D | H | -2.3242 | |
| 28 | Y | H | -1.2264 | |
| 29 | T | H | -0.7048 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.3072 | |
| 36 | D | H | -0.6456 | |
| 37 | Y | H | 0.1139 | |
| 38 | N | H | -0.1907 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7795 | |
| 45 | A | H | -1.1221 | |
| 46 | P | H | -0.9141 | |
| 47 | G | H | -1.3540 | |
| 48 | Q | H | -2.0571 | |
| 49 | R | H | -1.7561 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9888 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | N | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -0.6382 | |
| 58 | P | H | 0.0000 | |
| 59 | Y | H | 0.4865 | |
| 62 | S | H | 0.0187 | |
| 63 | G | H | -0.5456 | |
| 64 | G | H | -0.5668 | |
| 65 | T | H | -0.4134 | |
| 66 | S | H | -0.3258 | |
| 67 | Y | H | -0.7997 | |
| 68 | N | H | -1.6785 | |
| 69 | Q | H | -2.7543 | |
| 70 | K | H | -2.9069 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.9143 | |
| 74 | G | H | -1.9485 | |
| 75 | R | H | -1.6141 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9217 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.7884 | |
| 80 | R | H | -0.9208 | |
| 81 | D | H | -1.0978 | |
| 82 | T | H | -0.4552 | |
| 83 | S | H | -0.5401 | |
| 84 | A | H | -0.6180 | |
| 85 | S | H | -0.6984 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.6826 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.5165 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.1193 | |
| 93 | S | H | -1.1257 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.7869 | |
| 96 | S | H | -2.2098 | |
| 97 | E | H | -2.4637 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -1.2641 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2234 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | H | H | 0.0000 | |
| 109 | Y | H | 1.3013 | |
| 110 | Y | H | 1.5443 | |
| 111 | G | H | 0.5531 | |
| 111A | S | H | 0.3254 | |
| 112B | S | H | 0.7041 | |
| 112A | Y | H | 1.2879 | |
| 112 | V | H | 1.0528 | |
| 113 | Y | H | 0.9547 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.0147 | |
| 117 | Y | H | -0.0130 | |
| 118 | W | H | -0.1309 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1243 | |
| 121 | G | H | -0.4905 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.4928 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -1.6188 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.6106 | |
| 128 | S | H | -1.1773 | |
| 1 | D | L | -1.4502 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7734 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5215 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.1150 | |
| 8 | P | L | -1.2423 | |
| 9 | D | L | -2.1590 | |
| 10 | S | L | -1.4470 | |
| 11 | L | L | -0.6844 | |
| 12 | A | L | -0.3642 | |
| 13 | V | L | -0.8821 | |
| 14 | S | L | -0.9010 | |
| 15 | L | L | 0.1157 | |
| 16 | G | L | -1.1582 | |
| 17 | E | L | -2.6734 | |
| 18 | R | L | -2.7705 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.5188 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.9387 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.0079 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.9315 | |
| 27 | Q | L | -1.5210 | |
| 28 | S | L | -0.8044 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | -0.1786 | |
| 31 | Y | L | 0.0714 | |
| 32 | S | L | -0.6338 | |
| 33 | S | L | -0.7067 | |
| 34 | N | L | -1.0519 | |
| 35 | Q | L | -1.6679 | |
| 36 | K | L | -1.3196 | |
| 37 | N | L | 0.0000 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7014 | |
| 45 | K | L | -1.0924 | |
| 46 | P | L | -0.7692 | |
| 47 | G | L | -1.2287 | |
| 48 | Q | L | -1.6125 | |
| 49 | P | L | -1.0540 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.9029 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1509 | |
| 56 | W | L | -0.2448 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6479 | |
| 66 | T | L | -0.5435 | |
| 67 | R | L | -1.3421 | |
| 68 | E | L | -1.0056 | |
| 69 | S | L | -0.7494 | |
| 70 | G | L | -0.9211 | |
| 71 | V | L | -1.0413 | |
| 72 | P | L | -1.2797 | |
| 74 | D | L | -2.1744 | |
| 75 | R | L | -1.5657 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.8850 | |
| 78 | G | L | -0.4601 | |
| 79 | S | L | -0.6044 | |
| 80 | G | L | -1.0638 | |
| 83 | S | L | -1.1332 | |
| 84 | G | L | -0.9997 | |
| 85 | T | L | -1.4908 | |
| 86 | D | L | -1.9993 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7273 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6096 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.8624 | |
| 93 | S | L | -1.8001 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.0413 | |
| 96 | A | L | -0.6020 | |
| 97 | E | L | -1.8511 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.3855 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.4385 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | Y | L | 0.5322 | |
| 109 | S | L | 0.0750 | |
| 114 | Y | L | 0.5132 | |
| 115 | P | L | -0.3241 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | 0.0455 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.1496 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2916 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.6679 | |
| 126 | I | L | 0.0048 | |
| 127 | K | L | -1.2432 |