| Chain sequence(s) |
B: PIPHNRFGLRAWLRKHFDEEYVNEIEEEMDKEIAEVTKDLAPDAKLTRDQYHQINIIEFHYRQRVEWHLRN
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | B | -0.3006 | |
| 2 | I | B | -0.3766 | |
| 3 | P | B | -0.4839 | |
| 4 | H | B | -0.8867 | |
| 5 | N | B | -0.3571 | |
| 6 | R | B | -0.0221 | |
| 7 | F | B | 1.2885 | |
| 8 | G | B | 0.3208 | |
| 9 | L | B | 0.0000 | |
| 10 | R | B | -0.6482 | |
| 11 | A | B | -0.6843 | |
| 12 | W | B | -0.8304 | |
| 13 | L | B | 0.0000 | |
| 14 | R | B | -3.1352 | |
| 15 | K | B | -3.1225 | |
| 16 | H | B | -2.3022 | |
| 17 | F | B | -2.4358 | |
| 18 | D | B | -3.8066 | |
| 19 | E | B | -4.4628 | |
| 20 | E | B | -3.8221 | |
| 21 | Y | B | -2.7095 | |
| 22 | V | B | 0.0000 | |
| 23 | N | B | -3.8453 | |
| 24 | E | B | -3.7812 | |
| 25 | I | B | -2.6419 | |
| 26 | E | B | -2.7676 | |
| 27 | E | B | -4.2430 | |
| 28 | E | B | -4.0284 | |
| 29 | M | B | 0.0000 | |
| 30 | D | B | -3.2798 | |
| 31 | K | B | -4.1742 | |
| 32 | E | B | -3.5158 | |
| 33 | I | B | 0.0000 | |
| 34 | A | B | -2.8505 | |
| 35 | E | B | -3.3983 | |
| 36 | V | B | -2.1626 | |
| 37 | T | B | -1.9998 | |
| 38 | K | B | -3.2779 | |
| 39 | D | B | -2.6587 | |
| 40 | L | B | -1.6776 | |
| 41 | A | B | -1.3146 | |
| 42 | P | B | -1.4157 | |
| 43 | D | B | -2.1645 | |
| 44 | A | B | -1.7470 | |
| 45 | K | B | -1.9497 | |
| 46 | L | B | -1.0682 | |
| 47 | T | B | -1.5256 | |
| 48 | R | B | -2.8145 | |
| 49 | D | B | -2.8895 | |
| 50 | Q | B | -1.7724 | |
| 51 | Y | B | -0.8075 | |
| 52 | H | B | -1.9423 | |
| 53 | Q | B | -1.3664 | |
| 54 | I | B | 0.0000 | |
| 55 | N | B | -0.8010 | |
| 56 | I | B | 0.4514 | |
| 57 | I | B | 0.0000 | |
| 58 | E | B | 0.0000 | |
| 59 | F | B | 0.8986 | |
| 60 | H | B | -0.1082 | |
| 61 | Y | B | 0.0000 | |
| 62 | R | B | -0.5939 | |
| 63 | Q | B | -0.7379 | |
| 64 | R | B | -1.0113 | |
| 65 | V | B | 0.0000 | |
| 66 | E | B | -0.8230 | |
| 67 | W | B | -0.4821 | |
| 68 | H | B | -0.9853 | |
| 69 | L | B | -0.6877 | |
| 70 | R | B | -1.8916 | |
| 71 | N | B | -1.8467 |