| Chain sequence(s) |
A: ECKGFGKSCVPGKNECCSGYACNSRDKWCKVLL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:13)
[INFO] Main: Simulation completed successfully. (00:01:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9138 | |
| 2 | C | A | -1.2316 | |
| 3 | K | A | -1.0845 | |
| 4 | G | A | -0.1495 | |
| 5 | F | A | 1.2593 | |
| 6 | G | A | -0.4241 | |
| 7 | K | A | -1.5459 | |
| 8 | S | A | -1.0950 | |
| 9 | C | A | 0.0000 | |
| 10 | V | A | 0.0010 | |
| 11 | P | A | -0.9839 | |
| 12 | G | A | -1.5654 | |
| 13 | K | A | -2.6427 | |
| 14 | N | A | -2.6240 | |
| 15 | E | A | -2.4549 | |
| 16 | C | A | 0.0000 | |
| 17 | C | A | -0.5912 | |
| 18 | S | A | -0.5367 | |
| 19 | G | A | 0.1667 | |
| 20 | Y | A | 0.9597 | |
| 21 | A | A | 0.0293 | |
| 22 | C | A | -1.0457 | |
| 23 | N | A | -1.2558 | |
| 24 | S | A | -1.8089 | |
| 25 | R | A | -2.8488 | |
| 26 | D | A | -2.7183 | |
| 27 | K | A | -2.5780 | |
| 28 | W | A | -1.3280 | |
| 29 | C | A | 0.0000 | |
| 30 | K | A | 0.0179 | |
| 31 | V | A | 2.0291 | |
| 32 | L | A | 2.4944 | |
| 33 | L | A | 2.4251 |