| Chain sequence(s) |
A: HHQKLVFFAEDVGSNKGAIIGLMVGGVV
C: HHQKLVFFAEDVGSNKGAIIGLMVGGVV B: HHQKLVFFAEDVGSNKGAIIGLMVGGVV E: HHQKLVFFAEDVGSNKGAIIGLMVGGVV D: HHQKLVFFAEDVGSNKGAIIGLMVGGVV G: HHQKLVFFAEDVGSNKGAIIGLMVGGVV F: HHQKLVFFAEDVGSNKGAIIGLMVGGVV I: HHQKLVFFAEDVGSNKGAIIGLMVGGVV H: HHQKLVFFAEDVGSNKGAIIGLMVGGVV K: HHQKLVFFAEDVGSNKGAIIGLMVGGVV J: HHQKLVFFAEDVGSNKGAIIGLMVGGVV L: HHQKLVFFAEDVGSNKGAIIGLMVGGVV input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:29)
[INFO] Main: Simulation completed successfully. (00:06:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 13 | H | A | -2.2643 | |
| 14 | H | A | -2.6278 | |
| 15 | Q | A | -2.2822 | |
| 16 | K | A | -1.7739 | |
| 17 | L | A | 0.0464 | |
| 18 | V | A | 1.1657 | |
| 19 | F | A | 2.1171 | |
| 20 | F | A | 1.6628 | |
| 21 | A | A | 0.1050 | |
| 22 | E | A | -1.3799 | |
| 23 | D | A | -1.1679 | |
| 24 | V | A | -0.2465 | |
| 25 | G | A | -0.3136 | |
| 26 | S | A | -1.0895 | |
| 27 | N | A | -1.8183 | |
| 28 | K | A | -2.4424 | |
| 29 | G | A | -1.5598 | |
| 30 | A | A | -0.2966 | |
| 31 | I | A | 0.5755 | |
| 32 | I | A | 1.1210 | |
| 33 | G | A | 0.3930 | |
| 34 | L | A | 1.4618 | |
| 35 | M | A | 1.6007 | |
| 36 | V | A | 1.7793 | |
| 37 | G | A | 1.0269 | |
| 38 | G | A | 1.4025 | |
| 39 | V | A | 2.9236 | |
| 40 | V | A | 3.0266 | |
| 13 | H | B | -2.2529 | |
| 14 | H | B | -2.6177 | |
| 15 | Q | B | -2.2731 | |
| 16 | K | B | -1.8241 | |
| 17 | L | B | -0.0679 | |
| 18 | V | B | 0.8989 | |
| 19 | F | B | 1.9027 | |
| 20 | F | B | 1.3016 | |
| 21 | A | B | -0.1665 | |
| 22 | E | B | -1.7182 | |
| 23 | D | B | -1.5828 | |
| 24 | V | B | -0.4424 | |
| 25 | G | B | -0.4510 | |
| 26 | S | B | -1.3580 | |
| 27 | N | B | -2.2143 | |
| 28 | K | B | -2.7455 | |
| 29 | G | B | -1.8848 | |
| 30 | A | B | -0.4366 | |
| 31 | I | B | 0.4810 | |
| 32 | I | B | 1.1136 | |
| 33 | G | B | 0.5049 | |
| 34 | L | B | 1.5117 | |
| 35 | M | B | 1.6163 | |
| 36 | V | B | 1.7874 | |
| 37 | G | B | 1.0302 | |
| 38 | G | B | 1.4006 | |
| 39 | V | B | 2.9215 | |
| 40 | V | B | 3.0231 | |
| 13 | H | C | -2.5700 | |
| 14 | H | C | -2.6332 | |
| 15 | Q | C | -2.1962 | |
| 16 | K | C | -1.5484 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 0.8034 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | 0.9761 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | -1.2264 | |
| 23 | D | C | 0.0000 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | -0.1897 | |
| 26 | S | C | 0.0000 | |
| 27 | N | C | 0.0000 | |
| 28 | K | C | -2.2588 | |
| 29 | G | C | -1.2850 | |
| 30 | A | C | -0.3165 | |
| 31 | I | C | 0.0000 | |
| 32 | I | C | 0.0000 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 0.0000 | |
| 35 | M | C | 1.2443 | |
| 36 | V | C | 1.0341 | |
| 37 | G | C | 1.1261 | |
| 38 | G | C | 1.5554 | |
| 39 | V | C | 2.8432 | |
| 40 | V | C | 2.4152 | |
| 13 | H | D | -2.5667 | |
| 14 | H | D | -2.6213 | |
| 15 | Q | D | -2.2214 | |
| 16 | K | D | -1.6199 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.6332 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.9041 | |
| 21 | A | D | 0.0000 | |
| 22 | E | D | -1.6593 | |
| 23 | D | D | 0.0000 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | -0.2954 | |
| 26 | S | D | 0.0000 | |
| 27 | N | D | 0.0000 | |
| 28 | K | D | -3.0117 | |
| 29 | G | D | -1.6753 | |
| 30 | A | D | -0.5093 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.0000 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 0.0000 | |
| 35 | M | D | 1.2506 | |
| 36 | V | D | 1.0382 | |
| 37 | G | D | 1.1272 | |
| 38 | G | D | 1.5519 | |
| 39 | V | D | 2.8398 | |
| 40 | V | D | 2.4052 | |
| 13 | H | E | -2.4068 | |
| 14 | H | E | -2.1812 | |
| 15 | Q | E | -1.7337 | |
| 16 | K | E | -1.3030 | |
| 17 | L | E | 0.0000 | |
| 18 | V | E | 0.4311 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.6671 | |
| 21 | A | E | 0.0000 | |
| 22 | E | E | -1.6185 | |
| 23 | D | E | 0.0000 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | -0.3460 | |
| 26 | S | E | 0.0000 | |
| 27 | N | E | 0.0000 | |
| 28 | K | E | -1.5253 | |
| 29 | G | E | -0.9313 | |
| 30 | A | E | -0.3257 | |
| 31 | I | E | 0.0000 | |
| 32 | I | E | 0.0000 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 0.0000 | |
| 35 | M | E | 0.7929 | |
| 36 | V | E | 0.6070 | |
| 37 | G | E | 0.6811 | |
| 38 | G | E | 1.1136 | |
| 39 | V | E | 2.6232 | |
| 40 | V | E | 2.0149 | |
| 13 | H | F | -2.4419 | |
| 14 | H | F | -2.2657 | |
| 15 | Q | F | -1.8119 | |
| 16 | K | F | -1.4187 | |
| 17 | L | F | 0.0000 | |
| 18 | V | F | 0.3766 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.6330 | |
| 21 | A | F | 0.0000 | |
| 22 | E | F | -1.8157 | |
| 23 | D | F | 0.0000 | |
| 24 | V | F | 0.0000 | |
| 25 | G | F | -0.3334 | |
| 26 | S | F | 0.0000 | |
| 27 | N | F | 0.0000 | |
| 28 | K | F | -1.9594 | |
| 29 | G | F | -1.1107 | |
| 30 | A | F | -0.4194 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.0000 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.0000 | |
| 35 | M | F | 0.7952 | |
| 36 | V | F | 0.6065 | |
| 37 | G | F | 0.6799 | |
| 38 | G | F | 1.1139 | |
| 39 | V | F | 2.6251 | |
| 40 | V | F | 2.0120 | |
| 13 | H | G | -2.4050 | |
| 14 | H | G | -2.1859 | |
| 15 | Q | G | 0.0000 | |
| 16 | K | G | -1.2610 | |
| 17 | L | G | 0.0000 | |
| 18 | V | G | 0.6084 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 0.6908 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | -1.6915 | |
| 23 | D | G | -1.4773 | |
| 24 | V | G | 0.0000 | |
| 25 | G | G | -0.4385 | |
| 26 | S | G | 0.0000 | |
| 27 | N | G | 0.0000 | |
| 28 | K | G | -1.4393 | |
| 29 | G | G | -1.0489 | |
| 30 | A | G | -0.3675 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.0000 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.0000 | |
| 35 | M | G | 0.7218 | |
| 36 | V | G | 0.5163 | |
| 37 | G | G | 0.5643 | |
| 38 | G | G | 1.1498 | |
| 39 | V | G | 2.5139 | |
| 40 | V | G | 2.0246 | |
| 13 | H | H | -2.4245 | |
| 14 | H | H | -2.2294 | |
| 15 | Q | H | -1.8478 | |
| 16 | K | H | -1.3276 | |
| 17 | L | H | 0.0000 | |
| 18 | V | H | 0.4933 | |
| 19 | F | H | 0.0000 | |
| 20 | F | H | 0.5630 | |
| 21 | A | H | 0.0000 | |
| 22 | E | H | -1.9506 | |
| 23 | D | H | -1.6290 | |
| 24 | V | H | 0.0000 | |
| 25 | G | H | -0.4435 | |
| 26 | S | H | 0.0000 | |
| 27 | N | H | 0.0000 | |
| 28 | K | H | -1.4704 | |
| 29 | G | H | -1.0412 | |
| 30 | A | H | -0.3766 | |
| 31 | I | H | 0.0000 | |
| 32 | I | H | 0.0000 | |
| 33 | G | H | 0.0000 | |
| 34 | L | H | 0.0000 | |
| 35 | M | H | 0.7214 | |
| 36 | V | H | 0.5141 | |
| 37 | G | H | 0.5654 | |
| 38 | G | H | 1.1543 | |
| 39 | V | H | 2.5190 | |
| 40 | V | H | 2.0451 | |
| 13 | H | I | -2.5257 | |
| 14 | H | I | -2.5593 | |
| 15 | Q | I | -2.0934 | |
| 16 | K | I | -1.3792 | |
| 17 | L | I | 0.0000 | |
| 18 | V | I | 1.3669 | |
| 19 | F | I | 0.0000 | |
| 20 | F | I | 1.5376 | |
| 21 | A | I | 0.0000 | |
| 22 | E | I | -2.2300 | |
| 23 | D | I | -2.3892 | |
| 24 | V | I | 0.0000 | |
| 25 | G | I | -0.8807 | |
| 26 | S | I | 0.0000 | |
| 27 | N | I | 0.0000 | |
| 28 | K | I | -1.7112 | |
| 29 | G | I | -1.3545 | |
| 30 | A | I | -0.5729 | |
| 31 | I | I | 0.0000 | |
| 32 | I | I | 0.0000 | |
| 33 | G | I | 0.0000 | |
| 34 | L | I | 0.0000 | |
| 35 | M | I | 0.9834 | |
| 36 | V | I | 0.5882 | |
| 37 | G | I | 0.6565 | |
| 38 | G | I | 1.2003 | |
| 39 | V | I | 2.6826 | |
| 40 | V | I | 2.1418 | |
| 13 | H | J | -2.5264 | |
| 14 | H | J | -2.5678 | |
| 15 | Q | J | 0.0000 | |
| 16 | K | J | -1.4979 | |
| 17 | L | J | 0.0000 | |
| 18 | V | J | 1.0272 | |
| 19 | F | J | 0.0000 | |
| 20 | F | J | 1.1305 | |
| 21 | A | J | 0.0000 | |
| 22 | E | J | -2.7686 | |
| 23 | D | J | -2.6121 | |
| 24 | V | J | 0.0000 | |
| 25 | G | J | -0.9279 | |
| 26 | S | J | 0.0000 | |
| 27 | N | J | 0.0000 | |
| 28 | K | J | -1.7236 | |
| 29 | G | J | -1.3297 | |
| 30 | A | J | -0.5537 | |
| 31 | I | J | 0.0000 | |
| 32 | I | J | 0.0000 | |
| 33 | G | J | 0.0000 | |
| 34 | L | J | 0.0000 | |
| 35 | M | J | 0.9809 | |
| 36 | V | J | 0.5827 | |
| 37 | G | J | 0.6572 | |
| 38 | G | J | 1.2174 | |
| 39 | V | J | 2.7184 | |
| 40 | V | J | 2.1710 | |
| 13 | H | K | -2.1825 | |
| 14 | H | K | -2.6294 | |
| 15 | Q | K | -2.2448 | |
| 16 | K | K | -1.8707 | |
| 17 | L | K | 0.4587 | |
| 18 | V | K | 2.4569 | |
| 19 | F | K | 2.9329 | |
| 20 | F | K | 2.4752 | |
| 21 | A | K | -0.0620 | |
| 22 | E | K | -2.6153 | |
| 23 | D | K | -2.9787 | |
| 24 | V | K | -1.2234 | |
| 25 | G | K | -0.9514 | |
| 26 | S | K | -1.6692 | |
| 27 | N | K | -1.8145 | |
| 28 | K | K | -2.3126 | |
| 29 | G | K | -1.3032 | |
| 30 | A | K | -0.4534 | |
| 31 | I | K | 0.1296 | |
| 32 | I | K | 0.8467 | |
| 33 | G | K | 0.0469 | |
| 34 | L | K | 1.1239 | |
| 35 | M | K | 1.5063 | |
| 36 | V | K | 0.7684 | |
| 37 | G | K | 0.4575 | |
| 38 | G | K | 0.7971 | |
| 39 | V | K | 2.6646 | |
| 40 | V | K | 2.2420 | |
| 13 | H | L | -2.1777 | |
| 14 | H | L | -2.6277 | |
| 15 | Q | L | -2.2859 | |
| 16 | K | L | -2.0100 | |
| 17 | L | L | 0.1763 | |
| 18 | V | L | 1.8481 | |
| 19 | F | L | 2.5097 | |
| 20 | F | L | 2.1446 | |
| 21 | A | L | -0.2541 | |
| 22 | E | L | -2.8302 | |
| 23 | D | L | -3.1025 | |
| 24 | V | L | -1.3083 | |
| 25 | G | L | -0.9523 | |
| 26 | S | L | -1.7077 | |
| 27 | N | L | -1.7899 | |
| 28 | K | L | -2.2486 | |
| 29 | G | L | -1.2790 | |
| 30 | A | L | -0.4403 | |
| 31 | I | L | 0.1471 | |
| 32 | I | L | 0.8647 | |
| 33 | G | L | 0.1605 | |
| 34 | L | L | 1.2261 | |
| 35 | M | L | 1.5162 | |
| 36 | V | L | 0.7736 | |
| 37 | G | L | 0.4624 | |
| 38 | G | L | 0.8135 | |
| 39 | V | L | 2.6978 | |
| 40 | V | L | 2.2868 |