Chain sequence(s) |
H: QMQLVQSGPEVKKPGTSVKVSCKASGYTFTDYNVDWVRQARGQRLEWIGDINPNDGGTIYAQKFQERVTITVDKSTSTAYMELSSLRSEDTAVYYCARNYRWFGAMDHWGQGTTVTVSS
L: DIVMTQTPLSLSVTPGQPASISCKASQSLDYEGDSDMNWYLQKPGQPPQLLIYGASNLESGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQSTEDPRTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:43) [INFO] Main: Simulation completed successfully. (00:02:45) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5143 | |
2 | M | H | 0.0000 | |
3 | Q | H | -1.1898 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.2854 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.6498 | |
8 | G | H | -0.7515 | |
9 | P | H | -0.3187 | |
11 | E | H | -0.1133 | |
12 | V | H | 0.9120 | |
13 | K | H | -0.8757 | |
14 | K | H | -2.2058 | |
15 | P | H | -2.1657 | |
16 | G | H | -1.6372 | |
17 | T | H | -1.2872 | |
18 | S | H | -1.3967 | |
19 | V | H | 0.0000 | |
20 | K | H | -2.0798 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5800 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6071 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7518 | |
27 | G | H | -1.0420 | |
28 | Y | H | -0.5167 | |
29 | T | H | -0.2762 | |
30 | F | H | 0.0000 | |
35 | T | H | -1.3768 | |
36 | D | H | -1.1805 | |
37 | Y | H | -0.7092 | |
38 | N | H | -0.8914 | |
39 | V | H | 0.0000 | |
40 | D | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | 0.0000 | |
45 | A | H | -1.8579 | |
46 | R | H | -2.5118 | |
47 | G | H | -2.1119 | |
48 | Q | H | -2.5871 | |
49 | R | H | -2.1094 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.0392 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | D | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | N | H | -1.3701 | |
58 | P | H | 0.0000 | |
59 | N | H | -2.6901 | |
62 | D | H | -2.8115 | |
63 | G | H | -1.9257 | |
64 | G | H | -0.9813 | |
65 | T | H | 0.2926 | |
66 | I | H | 1.1829 | |
67 | Y | H | -0.4483 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.9068 | |
70 | K | H | -2.9865 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.6475 | |
74 | E | H | -3.0668 | |
75 | R | H | -1.8877 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.7898 | |
78 | I | H | 0.0000 | |
79 | T | H | -0.3503 | |
80 | V | H | -0.9464 | |
81 | D | H | -1.0843 | |
82 | K | H | -1.7932 | |
83 | S | H | -0.8714 | |
84 | T | H | -0.7616 | |
85 | S | H | -0.8838 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.5364 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.5479 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.3180 | |
93 | S | H | -1.3658 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.1452 | |
96 | S | H | -2.3981 | |
97 | E | H | -2.5555 | |
98 | D | H | 0.0000 | |
99 | T | H | -1.1048 | |
100 | A | H | 0.0000 | |
101 | V | H | -0.1957 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | N | H | 0.0000 | |
108 | Y | H | 0.4360 | |
109 | R | H | -0.6692 | |
110 | W | H | 0.8919 | |
112 | F | H | 1.0991 | |
113 | G | H | 0.0000 | |
114 | A | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | D | H | 0.0000 | |
117 | H | H | -0.5555 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.3267 | |
121 | G | H | -0.6576 | |
122 | T | H | 0.0000 | |
123 | T | H | -0.2579 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.3446 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9114 | |
128 | S | H | -0.7655 | |
1 | D | L | -2.1266 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.9495 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.1325 | |
6 | Q | L | 0.0000 | |
7 | T | L | 0.0911 | |
8 | P | L | 0.3977 | |
9 | L | L | 1.2140 | |
10 | S | L | 0.1269 | |
11 | L | L | -0.1890 | |
12 | S | L | -0.8513 | |
13 | V | L | 0.0000 | |
14 | T | L | -1.6061 | |
15 | P | L | -1.7691 | |
16 | G | L | -1.9995 | |
17 | Q | L | -2.2069 | |
18 | P | L | -1.7488 | |
19 | A | L | 0.0000 | |
20 | S | L | -0.6044 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.7616 | |
23 | C | L | 0.0000 | |
24 | K | L | -1.8574 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.6144 | |
27 | Q | L | -1.0715 | |
28 | S | L | -0.9648 | |
29 | L | L | 0.0000 | |
30 | D | L | -1.1647 | |
31 | Y | L | -0.4071 | |
34 | E | L | -1.8189 | |
35 | G | L | -1.6081 | |
36 | D | L | -1.4209 | |
37 | S | L | 0.0000 | |
38 | D | L | -0.0977 | |
39 | M | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | L | L | 0.0000 | |
44 | Q | L | -0.7648 | |
45 | K | L | -1.2577 | |
46 | P | L | -0.9082 | |
47 | G | L | -1.3454 | |
48 | Q | L | -1.7846 | |
49 | P | L | -1.1983 | |
50 | P | L | 0.0000 | |
51 | Q | L | -0.7167 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.5538 | |
56 | G | L | -0.1984 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.5449 | |
66 | N | L | -0.4013 | |
67 | L | L | -0.1030 | |
68 | E | L | -0.4093 | |
69 | S | L | -0.4388 | |
70 | G | L | -0.6914 | |
71 | V | L | -0.5301 | |
72 | P | L | -0.9544 | |
74 | D | L | -1.9568 | |
75 | R | L | 0.0000 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8354 | |
78 | G | L | -0.4651 | |
79 | S | L | -0.8275 | |
80 | G | L | -1.2318 | |
83 | S | L | -1.3423 | |
84 | G | L | -1.2836 | |
85 | T | L | -1.6831 | |
86 | D | L | -2.3926 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.9762 | |
89 | L | L | 0.0000 | |
90 | K | L | -1.1773 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.8755 | |
93 | R | L | -2.7101 | |
94 | V | L | 0.0000 | |
95 | E | L | -2.5435 | |
96 | A | L | -1.6957 | |
97 | E | L | -2.1234 | |
98 | D | L | 0.0000 | |
99 | V | L | -0.8386 | |
100 | G | L | 0.0000 | |
101 | V | L | -0.2269 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | -0.3236 | |
108 | T | L | -0.5042 | |
109 | E | L | -1.8719 | |
114 | D | L | -2.2043 | |
115 | P | L | -1.9652 | |
116 | R | L | -1.3240 | |
117 | T | L | -0.6740 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.2483 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.5536 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.1175 | |
126 | I | L | -1.0756 | |
127 | K | L | -1.7807 |