Project name: d107204d1707cc3

Status: done

Started: 2025-06-03 05:08:27
Settings
Chain sequence(s) H: QMQLVQSGPEVKKPGTSVKVSCKASGYTFTDYNVDWVRQARGQRLEWIGDINPNDGGTIYAQKFQERVTITVDKSTSTAYMELSSLRSEDTAVYYCARNYRWFGAMDHWGQGTTVTVSS
L: DIVMTQTPLSLSVTPGQPASISCKASQSLDYEGDSDMNWYLQKPGQPPQLLIYGASNLESGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQSTEDPRTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:45)
Show buried residues

Minimal score value
-3.1452
Maximal score value
1.214
Average score
-0.6776
Total score value
-155.8574

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5143
2 M H 0.0000
3 Q H -1.1898
4 L H 0.0000
5 V H 0.2854
6 Q H 0.0000
7 S H -0.6498
8 G H -0.7515
9 P H -0.3187
11 E H -0.1133
12 V H 0.9120
13 K H -0.8757
14 K H -2.2058
15 P H -2.1657
16 G H -1.6372
17 T H -1.2872
18 S H -1.3967
19 V H 0.0000
20 K H -2.0798
21 V H 0.0000
22 S H -0.5800
23 C H 0.0000
24 K H -0.6071
25 A H 0.0000
26 S H -0.7518
27 G H -1.0420
28 Y H -0.5167
29 T H -0.2762
30 F H 0.0000
35 T H -1.3768
36 D H -1.1805
37 Y H -0.7092
38 N H -0.8914
39 V H 0.0000
40 D H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 A H -1.8579
46 R H -2.5118
47 G H -2.1119
48 Q H -2.5871
49 R H -2.1094
50 L H 0.0000
51 E H -1.0392
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 D H 0.0000
56 I H 0.0000
57 N H -1.3701
58 P H 0.0000
59 N H -2.6901
62 D H -2.8115
63 G H -1.9257
64 G H -0.9813
65 T H 0.2926
66 I H 1.1829
67 Y H -0.4483
68 A H 0.0000
69 Q H -2.9068
70 K H -2.9865
71 F H 0.0000
72 Q H -2.6475
74 E H -3.0668
75 R H -1.8877
76 V H 0.0000
77 T H -0.7898
78 I H 0.0000
79 T H -0.3503
80 V H -0.9464
81 D H -1.0843
82 K H -1.7932
83 S H -0.8714
84 T H -0.7616
85 S H -0.8838
86 T H 0.0000
87 A H 0.0000
88 Y H -0.5364
89 M H 0.0000
90 E H -1.5479
91 L H 0.0000
92 S H -1.3180
93 S H -1.3658
94 L H 0.0000
95 R H -3.1452
96 S H -2.3981
97 E H -2.5555
98 D H 0.0000
99 T H -1.1048
100 A H 0.0000
101 V H -0.1957
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 N H 0.0000
108 Y H 0.4360
109 R H -0.6692
110 W H 0.8919
112 F H 1.0991
113 G H 0.0000
114 A H 0.0000
115 M H 0.0000
116 D H 0.0000
117 H H -0.5555
118 W H 0.0000
119 G H 0.0000
120 Q H -1.3267
121 G H -0.6576
122 T H 0.0000
123 T H -0.2579
124 V H 0.0000
125 T H -0.3446
126 V H 0.0000
127 S H -0.9114
128 S H -0.7655
1 D L -2.1266
2 I L 0.0000
3 V L 0.9495
4 M L 0.0000
5 T L -0.1325
6 Q L 0.0000
7 T L 0.0911
8 P L 0.3977
9 L L 1.2140
10 S L 0.1269
11 L L -0.1890
12 S L -0.8513
13 V L 0.0000
14 T L -1.6061
15 P L -1.7691
16 G L -1.9995
17 Q L -2.2069
18 P L -1.7488
19 A L 0.0000
20 S L -0.6044
21 I L 0.0000
22 S L -0.7616
23 C L 0.0000
24 K L -1.8574
25 A L 0.0000
26 S L -0.6144
27 Q L -1.0715
28 S L -0.9648
29 L L 0.0000
30 D L -1.1647
31 Y L -0.4071
34 E L -1.8189
35 G L -1.6081
36 D L -1.4209
37 S L 0.0000
38 D L -0.0977
39 M L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 L L 0.0000
44 Q L -0.7648
45 K L -1.2577
46 P L -0.9082
47 G L -1.3454
48 Q L -1.7846
49 P L -1.1983
50 P L 0.0000
51 Q L -0.7167
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.5538
56 G L -0.1984
57 A L 0.0000
65 S L -0.5449
66 N L -0.4013
67 L L -0.1030
68 E L -0.4093
69 S L -0.4388
70 G L -0.6914
71 V L -0.5301
72 P L -0.9544
74 D L -1.9568
75 R L 0.0000
76 F L 0.0000
77 S L -0.8354
78 G L -0.4651
79 S L -0.8275
80 G L -1.2318
83 S L -1.3423
84 G L -1.2836
85 T L -1.6831
86 D L -2.3926
87 F L 0.0000
88 T L -0.9762
89 L L 0.0000
90 K L -1.1773
91 I L 0.0000
92 S L -1.8755
93 R L -2.7101
94 V L 0.0000
95 E L -2.5435
96 A L -1.6957
97 E L -2.1234
98 D L 0.0000
99 V L -0.8386
100 G L 0.0000
101 V L -0.2269
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L -0.3236
108 T L -0.5042
109 E L -1.8719
114 D L -2.2043
115 P L -1.9652
116 R L -1.3240
117 T L -0.6740
118 F L 0.0000
119 G L 0.0000
120 G L -0.2483
121 G L 0.0000
122 T L 0.0000
123 K L -0.5536
124 V L 0.0000
125 E L -1.1175
126 I L -1.0756
127 K L -1.7807
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Laboratory of Theory of Biopolymers 2018