| Chain sequence(s) |
A: GPMDASVEEEGVRRALDDFAVGEYNKASNDMMYHHSRACCQVVRRARKQIVAGVNYFLDVELCCRTTCCTKTQLDNNCCPPFHDQQPHHLKRKAFCSFQQIYAVPWQGTMTLSKSTCQDA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:06)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:06)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:06)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:06)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:34)
[INFO] Main: Simulation completed successfully. (00:02:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 12 | G | A | -0.3427 | |
| 13 | P | A | -0.4015 | |
| 14 | M | A | -0.3425 | |
| 15 | D | A | -1.9841 | |
| 16 | A | A | -1.4169 | |
| 17 | S | A | -1.3947 | |
| 18 | V | A | -1.4526 | |
| 19 | E | A | -2.4206 | |
| 20 | E | A | -2.5376 | |
| 21 | E | A | -3.3061 | |
| 22 | G | A | -2.5450 | |
| 23 | V | A | 0.0000 | |
| 24 | R | A | -3.5377 | |
| 25 | R | A | -3.4041 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | -1.8032 | |
| 28 | D | A | -2.6073 | |
| 29 | F | A | -1.1974 | |
| 30 | A | A | 0.0000 | |
| 31 | V | A | -0.7807 | |
| 32 | G | A | -1.1401 | |
| 33 | E | A | -1.1122 | |
| 34 | Y | A | -0.6888 | |
| 35 | N | A | 0.0000 | |
| 36 | K | A | -2.1477 | |
| 37 | A | A | -1.1811 | |
| 38 | S | A | -1.0945 | |
| 39 | N | A | -1.3870 | |
| 40 | D | A | -0.6695 | |
| 41 | M | A | 0.6243 | |
| 42 | Y | A | 0.3795 | |
| 43 | H | A | -0.5931 | |
| 44 | S | A | 0.0000 | |
| 45 | R | A | -1.2707 | |
| 46 | A | A | -0.4284 | |
| 47 | C | A | -0.3617 | |
| 48 | Q | A | -0.6592 | |
| 49 | V | A | 0.4310 | |
| 50 | V | A | 0.8370 | |
| 51 | R | A | -0.8248 | |
| 52 | A | A | 0.0000 | |
| 53 | R | A | -1.5107 | |
| 54 | K | A | -0.4953 | |
| 55 | Q | A | 0.4732 | |
| 56 | I | A | 2.2081 | |
| 57 | V | A | 1.6259 | |
| 58 | A | A | 0.9072 | |
| 59 | G | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | N | A | 0.3910 | |
| 62 | Y | A | 0.0000 | |
| 63 | F | A | -0.8392 | |
| 64 | L | A | 0.0000 | |
| 65 | D | A | -0.0997 | |
| 66 | V | A | 0.0000 | |
| 67 | E | A | -0.5426 | |
| 68 | L | A | 0.0000 | |
| 69 | C | A | 0.0000 | |
| 70 | R | A | -1.2405 | |
| 71 | T | A | 0.0000 | |
| 72 | T | A | -0.0414 | |
| 73 | C | A | -0.1927 | |
| 74 | T | A | 0.0099 | |
| 75 | K | A | -0.6491 | |
| 76 | T | A | -0.6373 | |
| 77 | Q | A | -1.0381 | |
| 80 | L | A | 0.1421 | |
| 81 | D | A | -1.7642 | |
| 82 | N | A | -1.6739 | |
| 83 | C | A | -0.9263 | |
| 84 | P | A | -0.9494 | |
| 85 | F | A | -0.6521 | |
| 86 | H | A | -1.7299 | |
| 87 | D | A | -2.4908 | |
| 88 | Q | A | -2.5142 | |
| 89 | P | A | -2.3591 | |
| 90 | H | A | -2.2821 | |
| 91 | L | A | -1.6184 | |
| 92 | K | A | -2.4277 | |
| 93 | R | A | -3.2103 | |
| 94 | K | A | -2.3712 | |
| 95 | A | A | -1.5307 | |
| 96 | F | A | -0.3055 | |
| 97 | C | A | 0.0000 | |
| 98 | S | A | -0.4934 | |
| 99 | F | A | 0.0000 | |
| 100 | Q | A | -1.0997 | |
| 101 | I | A | 0.0000 | |
| 102 | Y | A | 0.4680 | |
| 103 | A | A | 0.0000 | |
| 104 | V | A | 0.3537 | |
| 105 | P | A | -0.0704 | |
| 106 | W | A | 0.3850 | |
| 107 | Q | A | -0.8539 | |
| 108 | G | A | -0.6892 | |
| 109 | T | A | -0.2386 | |
| 110 | M | A | -0.0215 | |
| 111 | T | A | 0.0071 | |
| 112 | L | A | -0.3821 | |
| 113 | S | A | -0.9651 | |
| 114 | K | A | -1.9129 | |
| 115 | S | A | -1.0644 | |
| 116 | T | A | -0.6144 | |
| 117 | C | A | -0.4412 | |
| 118 | Q | A | -1.8216 | |
| 119 | D | A | -2.2814 | |
| 120 | A | A | -1.1834 |