| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASGFTEEEFSSYGMAWFRQAPGKGRELVATISGDGGSTSYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAARGGRYWAYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.0601 | |
| 2 | V | C | -1.0965 | |
| 3 | Q | C | -1.2165 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.8171 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.6588 | |
| 8 | G | C | -1.0949 | |
| 9 | G | C | -0.8499 | |
| 10 | G | C | -0.0502 | |
| 11 | L | C | 0.8955 | |
| 12 | V | C | 0.0000 | |
| 13 | Q | C | -1.5414 | |
| 14 | P | C | -1.9040 | |
| 15 | G | C | -1.6297 | |
| 16 | G | C | -1.1186 | |
| 17 | S | C | -1.4610 | |
| 18 | L | C | -1.1944 | |
| 19 | R | C | -2.3236 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4671 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.1689 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.0863 | |
| 26 | G | C | -1.6365 | |
| 27 | F | C | 0.0000 | |
| 28 | T | C | -2.2399 | |
| 29 | E | C | -3.3739 | |
| 30 | E | C | -3.3358 | |
| 31 | E | C | -2.9068 | |
| 32 | F | C | 0.0000 | |
| 33 | S | C | -2.3483 | |
| 34 | S | C | -1.8056 | |
| 35 | Y | C | -1.1003 | |
| 36 | G | C | -0.8288 | |
| 37 | M | C | 0.0000 | |
| 38 | A | C | 0.0000 | |
| 39 | W | C | 0.0000 | |
| 40 | F | C | 0.0000 | |
| 41 | R | C | 0.0000 | |
| 42 | Q | C | -1.5979 | |
| 43 | A | C | -1.7481 | |
| 44 | P | C | -1.2189 | |
| 45 | G | C | -1.6848 | |
| 46 | K | C | -2.6799 | |
| 47 | G | C | -2.2577 | |
| 48 | R | C | -2.0438 | |
| 49 | E | C | -1.5139 | |
| 50 | L | C | 0.0444 | |
| 51 | V | C | 0.0000 | |
| 52 | A | C | 0.0000 | |
| 53 | T | C | -0.1424 | |
| 54 | I | C | 0.0000 | |
| 55 | S | C | -1.1375 | |
| 56 | G | C | -1.7481 | |
| 57 | D | C | -2.2916 | |
| 58 | G | C | -1.6293 | |
| 59 | G | C | -1.3037 | |
| 60 | S | C | -0.9452 | |
| 61 | T | C | -0.4081 | |
| 62 | S | C | -0.5404 | |
| 63 | Y | C | -0.8640 | |
| 64 | A | C | -1.3396 | |
| 65 | D | C | -2.4728 | |
| 66 | S | C | -1.8276 | |
| 67 | V | C | 0.0000 | |
| 68 | K | C | -2.6361 | |
| 69 | G | C | -1.7815 | |
| 70 | R | C | -1.4535 | |
| 71 | F | C | 0.0000 | |
| 72 | T | C | -1.0075 | |
| 73 | I | C | 0.0000 | |
| 74 | S | C | -0.5242 | |
| 75 | R | C | -1.1551 | |
| 76 | D | C | -1.6610 | |
| 77 | N | C | -2.4704 | |
| 78 | A | C | -1.8638 | |
| 79 | K | C | -2.4031 | |
| 80 | R | C | -2.3185 | |
| 81 | M | C | -0.7826 | |
| 82 | V | C | 0.0000 | |
| 83 | Y | C | -0.6409 | |
| 84 | L | C | 0.0000 | |
| 85 | Q | C | -1.6472 | |
| 86 | M | C | 0.0000 | |
| 87 | N | C | -1.6329 | |
| 88 | S | C | -1.4613 | |
| 89 | L | C | 0.0000 | |
| 90 | R | C | -2.9750 | |
| 91 | A | C | -2.0880 | |
| 92 | E | C | -2.4859 | |
| 93 | D | C | 0.0000 | |
| 94 | T | C | -1.0115 | |
| 95 | A | C | 0.0000 | |
| 96 | V | C | -0.5347 | |
| 97 | Y | C | 0.0000 | |
| 98 | Y | C | 0.0482 | |
| 99 | C | C | 0.0000 | |
| 100 | A | C | 0.0000 | |
| 101 | A | C | 0.0000 | |
| 102 | R | C | -0.9038 | |
| 103 | G | C | -0.7381 | |
| 104 | G | C | -1.2394 | |
| 105 | R | C | -1.6210 | |
| 106 | Y | C | 0.1128 | |
| 107 | W | C | 0.2031 | |
| 108 | A | C | 0.3115 | |
| 109 | Y | C | 0.5565 | |
| 110 | W | C | 0.4943 | |
| 111 | G | C | 0.0000 | |
| 112 | Q | C | -0.9197 | |
| 113 | G | C | 0.0000 | |
| 114 | T | C | 0.0000 | |
| 115 | Q | C | -1.1250 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | -0.4455 | |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -0.9032 | |
| 120 | S | C | -0.5842 |