| Chain sequence(s) |
B: AELAALRAQLKGAAEAYKLMLEVAKQLGLDTEKIEKKTKERIERIKKIIE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:38)
[INFO] Main: Simulation completed successfully. (00:02:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.2652 | |
| 2 | E | B | -0.8706 | |
| 3 | L | B | 0.7231 | |
| 4 | A | B | 0.1632 | |
| 5 | A | B | -0.3334 | |
| 6 | L | B | 0.0167 | |
| 7 | R | B | -0.9719 | |
| 8 | A | B | -1.1527 | |
| 9 | Q | B | -1.6586 | |
| 10 | L | B | -1.5115 | |
| 11 | K | B | -2.6840 | |
| 12 | G | B | -2.1043 | |
| 13 | A | B | -1.6270 | |
| 14 | A | B | -2.5839 | |
| 15 | E | B | -2.2014 | |
| 16 | A | B | -0.7963 | |
| 17 | Y | B | -1.1233 | |
| 18 | K | B | -1.3514 | |
| 19 | L | B | 0.1947 | |
| 20 | M | B | 0.3843 | |
| 21 | L | B | 0.0000 | |
| 22 | E | B | -1.8016 | |
| 23 | V | B | -0.0393 | |
| 24 | A | B | 0.0000 | |
| 25 | K | B | -2.3360 | |
| 26 | Q | B | -1.3258 | |
| 27 | L | B | 0.2543 | |
| 28 | G | B | -0.6825 | |
| 29 | L | B | -0.2441 | |
| 30 | D | B | -2.3687 | |
| 31 | T | B | -2.9439 | |
| 32 | E | B | -4.0635 | |
| 33 | K | B | -4.0944 | |
| 34 | I | B | -2.9397 | |
| 35 | E | B | -4.7582 | |
| 36 | K | B | -5.1142 | |
| 37 | K | B | -4.9991 | |
| 38 | T | B | 0.0000 | |
| 39 | K | B | -5.3399 | |
| 40 | E | B | -5.7188 | |
| 41 | R | B | -5.3575 | |
| 42 | I | B | 0.0000 | |
| 43 | E | B | -4.9820 | |
| 44 | R | B | -4.3351 | |
| 45 | I | B | -3.0759 | |
| 46 | K | B | -3.7224 | |
| 47 | K | B | -3.0237 | |
| 48 | I | B | -0.3782 | |
| 49 | I | B | -1.0080 | |
| 50 | E | B | -2.0560 |