| Chain sequence(s) |
A: MRACKTCCARCKCVPPGTYGNKEVCPCYARLKTHGNKPKCP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.2210 | |
| 2 | R | A | -1.8832 | |
| 3 | A | A | -1.2632 | |
| 4 | C | A | -0.9996 | |
| 5 | K | A | -2.2109 | |
| 6 | T | A | -1.7945 | |
| 7 | C | A | 0.0000 | |
| 8 | C | A | -0.9550 | |
| 9 | A | A | -1.5640 | |
| 10 | R | A | -2.3647 | |
| 11 | C | A | -1.2748 | |
| 12 | K | A | -1.7737 | |
| 13 | C | A | 0.2543 | |
| 14 | V | A | 1.4193 | |
| 15 | P | A | 0.0000 | |
| 16 | P | A | 0.2579 | |
| 17 | G | A | -0.2789 | |
| 18 | T | A | 0.1464 | |
| 19 | Y | A | 0.7061 | |
| 20 | G | A | -0.4059 | |
| 21 | N | A | -0.4201 | |
| 22 | K | A | -0.9812 | |
| 23 | E | A | -1.6523 | |
| 24 | V | A | 0.8107 | |
| 25 | C | A | 0.0000 | |
| 26 | P | A | -0.6369 | |
| 27 | C | A | -0.5249 | |
| 28 | Y | A | 0.0000 | |
| 29 | A | A | -1.6640 | |
| 30 | R | A | -2.5208 | |
| 31 | L | A | -2.3680 | |
| 32 | K | A | -3.6728 | |
| 33 | T | A | -2.5259 | |
| 34 | H | A | -2.4796 | |
| 35 | G | A | -2.5867 | |
| 36 | N | A | -3.0414 | |
| 37 | K | A | -3.4714 | |
| 38 | P | A | -2.9605 | |
| 39 | K | A | -2.6358 | |
| 40 | C | A | 0.0000 | |
| 41 | P | A | -0.5258 |