| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDFYHITYGETGWYSGYQEFTVPGSKSTATISGLKPGVDYTITVYAAYMYYSQYEWSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8131 | |
| 2 | S | A | 0.8376 | |
| 3 | S | A | 0.7335 | |
| 4 | V | A | 0.6387 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6431 | |
| 7 | K | A | -2.6787 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9146 | |
| 10 | V | A | 0.1265 | |
| 11 | V | A | 1.5502 | |
| 12 | A | A | 0.9031 | |
| 13 | A | A | 0.3147 | |
| 14 | T | A | -0.3398 | |
| 15 | P | A | -1.1227 | |
| 16 | T | A | -0.9986 | |
| 17 | S | A | -0.5278 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7598 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9653 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6560 | |
| 24 | A | A | -1.2197 | |
| 25 | P | A | 0.0623 | |
| 26 | A | A | 0.4957 | |
| 27 | V | A | 0.7500 | |
| 28 | T | A | 0.0518 | |
| 29 | V | A | -0.1568 | |
| 30 | D | A | -0.9809 | |
| 31 | F | A | -0.4546 | |
| 32 | Y | A | 0.0000 | |
| 33 | H | A | -0.0997 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.7937 | |
| 36 | Y | A | -0.6801 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.8135 | |
| 39 | T | A | -0.4312 | |
| 40 | G | A | 0.1867 | |
| 41 | W | A | 1.3477 | |
| 42 | Y | A | 1.5859 | |
| 43 | S | A | 0.4774 | |
| 44 | G | A | -0.1850 | |
| 45 | Y | A | -0.1912 | |
| 46 | Q | A | -1.5200 | |
| 47 | E | A | -1.8956 | |
| 48 | F | A | -0.5813 | |
| 49 | T | A | -0.1374 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9509 | |
| 52 | G | A | -1.1034 | |
| 53 | S | A | -1.2594 | |
| 54 | K | A | -2.0915 | |
| 55 | S | A | -1.3524 | |
| 56 | T | A | -0.7432 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2410 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6609 | |
| 61 | G | A | -1.0288 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3639 | |
| 64 | P | A | -1.6646 | |
| 65 | G | A | -1.4691 | |
| 66 | V | A | -1.4326 | |
| 67 | D | A | -2.0307 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7211 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.2398 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.5138 | |
| 74 | A | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 0.6060 | |
| 77 | M | A | 1.2174 | |
| 78 | Y | A | 1.5726 | |
| 79 | Y | A | 1.4829 | |
| 80 | S | A | 0.4122 | |
| 81 | Q | A | -0.0109 | |
| 82 | Y | A | 0.7980 | |
| 83 | E | A | 0.3968 | |
| 84 | W | A | 1.0092 | |
| 85 | S | A | 0.0000 | |
| 86 | S | A | 0.0780 | |
| 87 | P | A | 0.1772 | |
| 88 | I | A | 0.0838 | |
| 89 | S | A | -0.5394 | |
| 90 | I | A | -0.7161 | |
| 91 | N | A | -1.7352 | |
| 92 | Y | A | -1.5099 | |
| 93 | R | A | -2.5476 | |
| 94 | T | A | -1.5253 |