Project name: query_structure

Status: done

Started: 2026-03-16 23:02:43
Settings
Chain sequence(s) A: DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-4.7863
Maximal score value
2.0852
Average score
-1.4043
Total score value
-61.787

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.9833
2 C A -0.5532
3 L A -0.2163
4 S A -1.3200
5 G A -1.4983
6 R A -2.6659
7 Y A -2.0477
8 K A -2.6108
9 G A -1.4679
10 P A -0.7479
11 C A 0.0000
12 A A 1.0702
13 V A 2.0852
14 W A 1.4279
15 D A -0.5497
16 N A -1.3835
17 E A -2.7779
18 T A -2.3107
19 C A 0.0000
20 R A -4.5685
21 R A -4.6122
22 V A 0.0000
23 C A 0.0000
24 K A -4.7863
25 E A -4.4078
26 E A -3.3876
27 G A -3.0238
28 R A -3.4174
29 S A -2.7302
30 S A -3.3372
31 G A 0.0000
32 H A -2.1687
33 C A -0.6489
34 S A -0.2094
35 P A -0.1410
36 S A -0.1985
37 L A 0.4451
38 K A -1.1670
39 C A 0.0000
40 W A -0.6105
41 C A 0.0000
42 E A -2.6639
43 G A -1.8369
44 C A -0.7665
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Laboratory of Theory of Biopolymers 2018