| Chain sequence(s) |
A: DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:19)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9833 | |
| 2 | C | A | -0.5532 | |
| 3 | L | A | -0.2163 | |
| 4 | S | A | -1.3200 | |
| 5 | G | A | -1.4983 | |
| 6 | R | A | -2.6659 | |
| 7 | Y | A | -2.0477 | |
| 8 | K | A | -2.6108 | |
| 9 | G | A | -1.4679 | |
| 10 | P | A | -0.7479 | |
| 11 | C | A | 0.0000 | |
| 12 | A | A | 1.0702 | |
| 13 | V | A | 2.0852 | |
| 14 | W | A | 1.4279 | |
| 15 | D | A | -0.5497 | |
| 16 | N | A | -1.3835 | |
| 17 | E | A | -2.7779 | |
| 18 | T | A | -2.3107 | |
| 19 | C | A | 0.0000 | |
| 20 | R | A | -4.5685 | |
| 21 | R | A | -4.6122 | |
| 22 | V | A | 0.0000 | |
| 23 | C | A | 0.0000 | |
| 24 | K | A | -4.7863 | |
| 25 | E | A | -4.4078 | |
| 26 | E | A | -3.3876 | |
| 27 | G | A | -3.0238 | |
| 28 | R | A | -3.4174 | |
| 29 | S | A | -2.7302 | |
| 30 | S | A | -3.3372 | |
| 31 | G | A | 0.0000 | |
| 32 | H | A | -2.1687 | |
| 33 | C | A | -0.6489 | |
| 34 | S | A | -0.2094 | |
| 35 | P | A | -0.1410 | |
| 36 | S | A | -0.1985 | |
| 37 | L | A | 0.4451 | |
| 38 | K | A | -1.1670 | |
| 39 | C | A | 0.0000 | |
| 40 | W | A | -0.6105 | |
| 41 | C | A | 0.0000 | |
| 42 | E | A | -2.6639 | |
| 43 | G | A | -1.8369 | |
| 44 | C | A | -0.7665 |