| Chain sequence(s) |
B: SKEELLREVASLVEAALAAAEAAVAKATDPRVKEKAEFVLELARETLRKFREEYPGIEPLPAAAAFAAAAAAEPDVGAIARAAREVAERAAELYEEAEKLGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:38)
[INFO] Main: Simulation completed successfully. (00:03:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.1087 | |
| 2 | K | B | -2.1070 | |
| 3 | E | B | -2.7171 | |
| 4 | E | B | -2.8420 | |
| 5 | L | B | -2.1602 | |
| 6 | L | B | 0.0000 | |
| 7 | R | B | -2.3571 | |
| 8 | E | B | -2.0826 | |
| 9 | V | B | 0.0000 | |
| 10 | A | B | 0.0000 | |
| 11 | S | B | 0.0000 | |
| 12 | L | B | -0.8198 | |
| 13 | V | B | 0.0000 | |
| 14 | E | B | -0.9389 | |
| 15 | A | B | 0.0000 | |
| 16 | A | B | 0.0000 | |
| 17 | L | B | -1.3283 | |
| 18 | A | B | -0.5836 | |
| 19 | A | B | 0.0000 | |
| 20 | A | B | 0.0000 | |
| 21 | E | B | -1.9458 | |
| 22 | A | B | -0.9197 | |
| 23 | A | B | 0.0000 | |
| 24 | V | B | -1.1890 | |
| 25 | A | B | -0.7883 | |
| 26 | K | B | -1.1269 | |
| 27 | A | B | 0.0000 | |
| 28 | T | B | -0.8065 | |
| 29 | D | B | -1.6560 | |
| 30 | P | B | -2.1043 | |
| 31 | R | B | -3.0909 | |
| 32 | V | B | -2.1619 | |
| 33 | K | B | -2.5501 | |
| 34 | E | B | -2.9507 | |
| 35 | K | B | -2.1885 | |
| 36 | A | B | 0.0000 | |
| 37 | E | B | -2.0604 | |
| 38 | F | B | -0.4170 | |
| 39 | V | B | 0.0000 | |
| 40 | L | B | -1.8865 | |
| 41 | E | B | -2.2121 | |
| 42 | L | B | -1.5970 | |
| 43 | A | B | 0.0000 | |
| 44 | R | B | -3.2540 | |
| 45 | E | B | -3.1257 | |
| 46 | T | B | 0.0000 | |
| 47 | L | B | -2.7162 | |
| 48 | R | B | -3.6899 | |
| 49 | K | B | -3.6332 | |
| 50 | F | B | 0.0000 | |
| 51 | R | B | -3.4549 | |
| 52 | E | B | -3.9619 | |
| 53 | E | B | -3.5366 | |
| 54 | Y | B | 0.0000 | |
| 55 | P | B | -2.2598 | |
| 56 | G | B | -1.5561 | |
| 57 | I | B | 0.0000 | |
| 58 | E | B | -2.4551 | |
| 59 | P | B | -1.5663 | |
| 60 | L | B | -0.7446 | |
| 61 | P | B | -0.3094 | |
| 62 | A | B | 0.0391 | |
| 63 | A | B | 0.0018 | |
| 64 | A | B | 0.1622 | |
| 65 | A | B | 0.3615 | |
| 66 | F | B | 0.5382 | |
| 67 | A | B | 0.0192 | |
| 68 | A | B | 0.2465 | |
| 69 | A | B | 0.1383 | |
| 70 | A | B | 0.0000 | |
| 71 | A | B | -0.2842 | |
| 72 | A | B | -0.4397 | |
| 73 | E | B | -1.2256 | |
| 74 | P | B | -1.4406 | |
| 75 | D | B | -2.0778 | |
| 76 | V | B | -1.2983 | |
| 77 | G | B | -1.5351 | |
| 78 | A | B | -1.4321 | |
| 79 | I | B | 0.0000 | |
| 80 | A | B | 0.0000 | |
| 81 | R | B | -2.7147 | |
| 82 | A | B | -1.9072 | |
| 83 | A | B | 0.0000 | |
| 84 | R | B | -3.0072 | |
| 85 | E | B | -3.6825 | |
| 86 | V | B | -2.5884 | |
| 87 | A | B | 0.0000 | |
| 88 | E | B | -3.4512 | |
| 89 | R | B | -3.8974 | |
| 90 | A | B | 0.0000 | |
| 91 | A | B | -2.6059 | |
| 92 | E | B | -3.7091 | |
| 93 | L | B | -3.0743 | |
| 94 | Y | B | 0.0000 | |
| 95 | E | B | -4.0846 | |
| 96 | E | B | -3.6717 | |
| 97 | A | B | 0.0000 | |
| 98 | E | B | -3.2466 | |
| 99 | K | B | -3.0246 | |
| 100 | L | B | -1.2541 | |
| 101 | G | B | -1.2101 | |
| 102 | S | B | -0.8701 | |
| 103 | G | B | -0.8057 | |
| 104 | C | B | -0.6265 |