| Chain sequence(s) |
A: GGGHKFF
C: GGGHKFF B: GGGHKFF D: GGGHKFF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.3234 | |
| 2 | G | A | -1.6150 | |
| 3 | G | A | -2.0862 | |
| 4 | H | A | -1.8900 | |
| 5 | K | A | -0.3804 | |
| 6 | F | A | 2.4812 | |
| 7 | F | A | 3.3603 | |
| 1 | G | B | -1.2676 | |
| 2 | G | B | -1.7946 | |
| 3 | G | B | -1.9392 | |
| 4 | H | B | -2.0018 | |
| 5 | K | B | -0.3128 | |
| 6 | F | B | 2.7004 | |
| 7 | F | B | 3.5112 | |
| 1 | G | C | -1.2604 | |
| 2 | G | C | -1.6090 | |
| 3 | G | C | -2.1609 | |
| 4 | H | C | -1.4201 | |
| 5 | K | C | -1.5225 | |
| 6 | F | C | 0.7722 | |
| 7 | F | C | 2.4425 | |
| 1 | G | D | -1.1260 | |
| 2 | G | D | -1.7278 | |
| 3 | G | D | -1.8194 | |
| 4 | H | D | -1.6845 | |
| 5 | K | D | -1.2110 | |
| 6 | F | D | 1.5584 | |
| 7 | F | D | 2.7706 |