Project name: Query1

Status: done

Started: 2026-04-12 13:25:40
Settings
Chain sequence(s) A: QNSSQSMDLYILQNQRQYDAKIKQLADELANFKQLFQKQINALDVQADSMQLKLEQASAHLDPIILIDSWSKQCVQNYSVTIPTITVARDSIIKCKESISGILNAPESTYNTLNNYYKNNVKNGLAQCLKLHPTAQLNYTLCVTKVIGDANKYTITTQNTFNTNLKSSECTADNRIRNSWQCSFGQVYSITSKVELALQLIDSCISNKVICGSFEEQSCPNKSYVSLSEINPRNDTIRNPFKFVTNAMSCVEVLISS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:38)
Show buried residues

Minimal score value
-3.7932
Maximal score value
2.474
Average score
-0.8602
Total score value
-221.0807

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
22 Q A -2.1034
23 N A -2.5164
24 S A -1.8276
25 S A -1.7035
26 Q A -1.6001
27 S A -0.7370
28 M A 0.0000
29 D A -0.8917
30 L A 0.8455
31 Y A 0.6315
32 I A 0.1220
33 L A 0.2397
34 Q A -1.3970
35 N A -1.5987
36 Q A -2.0101
37 R A -3.1134
38 Q A -3.0283
39 Y A 0.0000
40 D A -2.8028
41 A A -2.3978
42 K A -2.3306
43 I A 0.0000
44 K A -3.2161
45 Q A -2.9774
46 L A 0.0000
47 A A -2.3599
48 D A -3.1884
49 E A -2.7151
50 L A 0.0000
51 A A -1.5591
52 N A -1.7355
53 F A -1.1460
54 K A -1.5742
55 Q A -1.6927
56 L A -0.3592
57 F A 0.0000
58 Q A -2.4464
59 K A -2.7085
60 Q A -2.1798
61 I A 0.0000
62 N A -2.4384
63 A A -1.2677
64 L A 0.0000
65 D A -1.5965
66 V A 0.0421
67 Q A -0.3404
68 A A 0.0000
69 D A -1.4560
70 S A -0.6958
71 M A 0.0000
72 Q A -0.4076
73 L A 0.0042
74 K A -0.8817
75 L A 0.0000
76 E A -1.3310
77 Q A -1.9426
78 A A 0.0000
79 S A -1.6237
80 A A -1.8070
81 H A -1.8031
82 L A 0.0000
83 D A -1.7393
84 P A -0.2549
85 I A 0.1451
86 I A -0.0451
87 L A 1.7571
88 I A 1.9407
89 D A 0.0327
90 S A -0.6189
91 W A -0.5224
92 S A 0.0000
93 K A -1.8371
94 Q A -2.1537
95 C A 0.0000
96 V A 0.0000
97 Q A -1.7956
98 N A -1.2434
99 Y A -0.2458
100 S A 0.3867
101 V A 1.2945
102 T A 0.6992
103 I A 0.7715
104 P A 0.8166
105 T A 0.8097
106 I A 0.4436
107 T A 0.3733
108 V A 1.2064
109 A A 0.0000
110 R A -1.3607
111 D A -1.5874
112 S A -0.8339
113 I A 0.0000
114 I A -1.5042
115 K A -2.3941
116 C A 0.0000
117 K A -2.3947
118 E A -2.4248
119 S A -1.0777
120 I A -0.7667
121 S A -0.7812
122 G A -0.9228
123 I A 0.0000
124 L A 0.0000
125 N A -1.7737
126 A A -1.2234
127 P A 0.0000
128 E A -1.6730
129 S A -1.4047
130 T A -1.3129
131 Y A -1.3451
132 N A -1.8442
133 T A -1.3369
134 L A 0.0000
135 N A -2.1398
136 N A -2.5951
137 Y A -2.2455
138 Y A 0.0000
139 K A -3.6359
140 N A -3.7932
141 N A -3.3250
142 V A 0.0000
143 K A -3.6312
144 N A -3.1441
145 G A -2.1159
146 L A -1.1033
147 A A -1.1357
148 Q A -1.0460
149 C A 0.0000
150 L A 0.1309
151 K A -0.7334
152 L A 0.6337
153 H A -0.0219
154 P A -0.3995
155 T A -0.3252
156 A A -0.2132
157 Q A -0.5831
158 L A 0.7868
159 N A 0.0501
160 Y A 0.0771
161 T A 0.3371
162 L A 0.6349
163 C A 0.2118
164 V A 0.0000
165 T A -0.6087
166 K A -1.8503
167 V A -1.7310
168 I A 0.0000
169 G A -2.2003
170 D A -2.9953
171 A A 0.0000
172 N A -2.1757
173 K A -2.1587
174 Y A -0.8157
175 T A 0.0000
176 I A 0.4057
177 T A -0.2813
178 T A 0.0000
179 Q A -0.7216
180 N A -1.2895
181 T A -0.9641
182 F A 0.0000
183 N A -1.7058
184 T A -1.6078
185 N A -1.8146
186 L A 0.0000
187 K A -2.4024
188 S A -1.4779
189 S A 0.0000
190 E A -2.6243
191 C A -1.5069
192 T A -1.7279
193 A A 0.0000
194 D A -3.3835
195 N A -3.3072
196 R A -2.9857
197 I A -2.6524
198 R A -3.4257
199 N A -2.9624
200 S A 0.0000
201 W A -0.7410
202 Q A -0.9973
203 C A -0.3339
204 S A 0.0000
205 F A 1.4499
206 G A 0.7114
207 Q A 0.5936
208 V A 0.9245
209 Y A 1.4582
210 S A 0.3956
211 I A 0.0000
212 T A -0.2238
213 S A -0.3399
214 K A -0.5626
215 V A 0.0000
216 E A -1.4855
217 L A -0.2907
218 A A 0.0000
219 L A -1.0088
220 Q A -1.5645
221 L A -0.7491
222 I A 0.0000
223 D A -2.1994
224 S A -1.3008
225 C A 0.0000
226 I A -1.2892
227 S A -1.6204
228 N A -2.1750
229 K A -1.5883
230 V A 0.3097
231 I A 1.9089
232 C A 1.3362
233 G A 0.8247
234 S A 0.4203
235 F A 0.4911
236 E A -2.3506
237 E A -2.8017
238 Q A -2.3941
239 S A -1.8830
240 C A -1.1933
241 P A -1.0420
242 N A -0.9679
243 K A -1.2600
244 S A 0.4615
245 Y A 1.6319
246 V A 0.0000
247 S A 0.5961
248 L A 0.6115
249 S A -0.8132
250 E A -1.7749
251 I A -1.3212
252 N A -2.5305
253 P A -2.3837
254 R A -3.2776
255 N A -3.1087
256 D A -2.9651
257 T A -1.7012
258 I A -1.2653
259 R A -2.3894
260 N A -1.8324
261 P A -0.3305
262 F A 0.4516
263 K A -0.7731
264 F A 0.9494
265 V A 1.1072
266 T A 0.0150
267 N A -0.9113
268 A A -0.3775
269 M A 0.0672
270 S A -0.0668
271 C A 0.0543
272 V A 0.0962
273 E A -0.4715
274 V A 0.6998
275 L A 1.3888
276 I A 2.4740
277 S A 1.2771
278 S A 0.5303
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Laboratory of Theory of Biopolymers 2018