| Chain sequence(s) |
A: MGFTEKQEALVNSSWELFKQNPSYSVLFYTIILKKAPAAKGMFSFLKDSAEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDATLGAIHIQKGVVDPHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAMN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | VT83A,VT53A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.154142 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:42)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:46)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:45)
[INFO] Main: Simulation completed successfully. (00:04:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8143 | |
| 2 | G | A | -0.6071 | |
| 3 | F | A | -1.1001 | |
| 4 | T | A | -1.7210 | |
| 5 | E | A | -2.9586 | |
| 6 | K | A | -2.9742 | |
| 7 | Q | A | 0.0000 | |
| 8 | E | A | -1.7859 | |
| 9 | A | A | -1.1608 | |
| 10 | L | A | -1.1758 | |
| 11 | V | A | 0.0000 | |
| 12 | N | A | -1.1419 | |
| 13 | S | A | -1.0293 | |
| 14 | S | A | 0.0000 | |
| 15 | W | A | 0.0000 | |
| 16 | E | A | -2.6618 | |
| 17 | L | A | -1.8493 | |
| 18 | F | A | 0.0000 | |
| 19 | K | A | -2.9666 | |
| 20 | Q | A | -2.5418 | |
| 21 | N | A | -1.8578 | |
| 22 | P | A | -1.5255 | |
| 23 | S | A | -0.8495 | |
| 24 | Y | A | -0.8781 | |
| 25 | S | A | 0.0000 | |
| 26 | V | A | -0.2323 | |
| 27 | L | A | -0.0872 | |
| 28 | F | A | 0.0000 | |
| 29 | Y | A | 0.0000 | |
| 30 | T | A | -0.5538 | |
| 31 | I | A | -0.9488 | |
| 32 | I | A | 0.0000 | |
| 33 | L | A | -1.3348 | |
| 34 | K | A | -2.2740 | |
| 35 | K | A | -2.1615 | |
| 36 | A | A | -1.2000 | |
| 37 | P | A | -1.1104 | |
| 38 | A | A | -0.5877 | |
| 39 | A | A | 0.0000 | |
| 40 | K | A | -1.5024 | |
| 41 | G | A | -1.4730 | |
| 42 | M | A | -0.9901 | |
| 43 | F | A | 0.0000 | |
| 44 | S | A | -1.3590 | |
| 45 | F | A | -1.4341 | |
| 46 | L | A | 0.0000 | |
| 47 | K | A | -2.9304 | |
| 48 | D | A | -2.8978 | |
| 49 | S | A | -1.8868 | |
| 50 | A | A | -1.5028 | |
| 51 | E | A | -2.3042 | |
| 52 | V | A | -1.2785 | |
| 53 | T | A | -1.2074 | mutated: VT53A |
| 54 | D | A | -2.1437 | |
| 55 | S | A | -1.5463 | |
| 56 | P | A | -1.5723 | |
| 57 | K | A | -2.3062 | |
| 58 | L | A | 0.0000 | |
| 59 | Q | A | -2.0184 | |
| 60 | A | A | -1.6647 | |
| 61 | H | A | -1.6171 | |
| 62 | A | A | 0.0000 | |
| 63 | E | A | -2.2878 | |
| 64 | K | A | -1.9675 | |
| 65 | V | A | -0.8030 | |
| 66 | F | A | 0.0000 | |
| 67 | G | A | -1.3883 | |
| 68 | M | A | -0.8911 | |
| 69 | V | A | 0.0000 | |
| 70 | H | A | -0.9569 | |
| 71 | D | A | -1.4828 | |
| 72 | S | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | I | A | -1.1050 | |
| 75 | Q | A | -1.3917 | |
| 76 | L | A | -1.5305 | |
| 77 | R | A | -2.5515 | |
| 78 | A | A | -1.2960 | |
| 79 | S | A | -1.3720 | |
| 80 | G | A | -1.7208 | |
| 81 | E | A | -2.2623 | |
| 82 | V | A | -1.4146 | |
| 83 | T | A | -0.7428 | mutated: VT83A |
| 84 | L | A | -0.3528 | |
| 85 | G | A | -0.6779 | |
| 86 | D | A | -0.8477 | |
| 87 | A | A | -0.1948 | |
| 88 | T | A | 0.0861 | |
| 89 | L | A | 0.3310 | |
| 90 | G | A | 0.0000 | |
| 91 | A | A | 0.5662 | |
| 92 | I | A | 0.9781 | |
| 93 | H | A | 0.5731 | |
| 94 | I | A | 0.9658 | |
| 95 | Q | A | -0.5747 | |
| 96 | K | A | -0.8855 | |
| 97 | G | A | -0.2708 | |
| 98 | V | A | 0.0521 | |
| 99 | V | A | 0.2781 | |
| 100 | D | A | -1.1703 | |
| 101 | P | A | -0.2028 | |
| 102 | H | A | -0.0521 | |
| 103 | F | A | 0.0000 | |
| 104 | V | A | 1.0366 | |
| 105 | V | A | 0.0452 | |
| 106 | V | A | 0.2146 | |
| 107 | K | A | -0.5198 | |
| 108 | E | A | -1.0350 | |
| 109 | A | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | L | A | -1.7071 | |
| 112 | E | A | -2.7791 | |
| 113 | T | A | 0.0000 | |
| 114 | I | A | 0.0000 | |
| 115 | K | A | -3.4669 | |
| 116 | E | A | -3.2649 | |
| 117 | A | A | 0.0000 | |
| 118 | S | A | 0.0000 | |
| 119 | G | A | -2.6388 | |
| 120 | E | A | -3.1440 | |
| 121 | K | A | -2.9448 | |
| 122 | W | A | -2.5412 | |
| 123 | S | A | -2.3073 | |
| 124 | E | A | -2.8123 | |
| 125 | E | A | -2.9115 | |
| 126 | L | A | 0.0000 | |
| 127 | S | A | -1.7123 | |
| 128 | T | A | -1.1744 | |
| 129 | A | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | E | A | -1.1383 | |
| 132 | V | A | -0.1476 | |
| 133 | A | A | 0.0000 | |
| 134 | Y | A | 0.0000 | |
| 135 | E | A | -1.5891 | |
| 136 | G | A | -1.2216 | |
| 137 | L | A | 0.0000 | |
| 138 | A | A | 0.0000 | |
| 139 | S | A | -1.2519 | |
| 140 | A | A | 0.0000 | |
| 141 | I | A | 0.0000 | |
| 142 | K | A | -1.7247 | |
| 143 | K | A | -2.3732 | |
| 144 | A | A | -1.0849 | |
| 145 | M | A | -0.6274 | |
| 146 | N | A | -1.6387 |