| Chain sequence(s) |
A: NSGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCELDVTCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVSQTSKLTRAETVFPDVDYVNSTEAETILDNITQSTQSFNDFTRVVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:43)
[INFO] Main: Simulation completed successfully. (00:06:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.4868 | |
| 2 | S | A | -1.3099 | |
| 3 | G | A | -1.5273 | |
| 4 | K | A | -1.9335 | |
| 5 | L | A | -0.5716 | |
| 6 | E | A | -1.6816 | |
| 7 | E | A | -1.1770 | |
| 8 | F | A | 1.2459 | |
| 9 | V | A | 1.1047 | |
| 10 | Q | A | -0.4132 | |
| 11 | G | A | -1.1682 | |
| 12 | N | A | -2.5308 | |
| 13 | L | A | -2.0966 | |
| 14 | E | A | -2.4103 | |
| 15 | R | A | -3.9374 | |
| 16 | E | A | -4.3232 | |
| 17 | C | A | 0.0000 | |
| 18 | M | A | -2.6075 | |
| 19 | E | A | -4.0387 | |
| 20 | E | A | -4.0819 | |
| 21 | K | A | -3.2583 | |
| 22 | C | A | -2.5473 | |
| 23 | S | A | -1.6784 | |
| 24 | F | A | -1.3223 | |
| 25 | E | A | -3.2640 | |
| 26 | E | A | -3.6050 | |
| 27 | A | A | 0.0000 | |
| 28 | R | A | -4.2740 | |
| 29 | E | A | -3.8856 | |
| 30 | V | A | -2.2256 | |
| 31 | F | A | 0.0000 | |
| 32 | E | A | -3.4537 | |
| 33 | N | A | -3.1497 | |
| 34 | T | A | -2.9952 | |
| 35 | E | A | -3.7463 | |
| 36 | R | A | -3.9340 | |
| 37 | T | A | 0.0000 | |
| 38 | T | A | -2.4085 | |
| 39 | E | A | -3.3398 | |
| 40 | F | A | -1.8972 | |
| 41 | W | A | -0.8905 | |
| 42 | K | A | -1.4992 | |
| 43 | Q | A | -2.0204 | |
| 44 | Y | A | -0.2274 | |
| 45 | V | A | 0.7255 | |
| 46 | D | A | -1.0096 | |
| 47 | G | A | -1.8106 | |
| 48 | D | A | -3.0691 | |
| 49 | Q | A | -2.9279 | |
| 50 | C | A | -2.5886 | |
| 51 | E | A | -2.8865 | |
| 52 | S | A | -1.9562 | |
| 53 | N | A | -1.8984 | |
| 54 | P | A | -1.2589 | |
| 55 | C | A | -0.8060 | |
| 56 | L | A | -0.1896 | |
| 57 | N | A | -0.8817 | |
| 58 | G | A | -0.4978 | |
| 59 | G | A | -0.3546 | |
| 60 | S | A | -0.5233 | |
| 61 | C | A | -1.2664 | |
| 62 | K | A | -1.9160 | |
| 63 | D | A | -2.7893 | |
| 64 | D | A | -2.4074 | |
| 65 | I | A | -0.5190 | |
| 66 | N | A | -1.4232 | |
| 67 | S | A | -1.5440 | |
| 68 | Y | A | -1.7611 | |
| 69 | E | A | -2.3592 | |
| 70 | C | A | -1.1230 | |
| 71 | W | A | 0.5219 | |
| 72 | C | A | 0.3259 | |
| 73 | P | A | 0.8621 | |
| 74 | F | A | 1.6520 | |
| 75 | G | A | 0.3775 | |
| 76 | F | A | 0.1779 | |
| 77 | E | A | -1.1424 | |
| 78 | G | A | -1.3203 | |
| 79 | K | A | -2.1559 | |
| 80 | N | A | -1.4656 | |
| 81 | C | A | 0.0000 | |
| 82 | E | A | -0.8334 | |
| 83 | L | A | -0.3845 | |
| 84 | D | A | -0.5530 | |
| 85 | V | A | -0.7950 | |
| 86 | T | A | -1.2393 | |
| 87 | C | A | -1.8701 | |
| 88 | N | A | -1.8532 | |
| 89 | I | A | -1.1210 | |
| 90 | K | A | -2.4179 | |
| 91 | N | A | -2.0042 | |
| 92 | G | A | 0.0000 | |
| 93 | R | A | -2.5459 | |
| 94 | C | A | 0.0000 | |
| 95 | E | A | -1.9605 | |
| 96 | Q | A | 0.0000 | |
| 97 | F | A | -0.6025 | |
| 98 | C | A | 0.0000 | |
| 99 | K | A | -2.4619 | |
| 100 | N | A | -2.9805 | |
| 101 | S | A | -2.3344 | |
| 102 | A | A | -1.9550 | |
| 103 | D | A | -3.0424 | |
| 104 | N | A | -3.0671 | |
| 105 | K | A | -2.9939 | |
| 106 | V | A | 0.0000 | |
| 107 | V | A | -0.9246 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -0.7199 | |
| 110 | C | A | -0.9130 | |
| 111 | T | A | -0.9345 | |
| 112 | E | A | -1.7566 | |
| 113 | G | A | -0.9397 | |
| 114 | Y | A | -1.1902 | |
| 115 | R | A | -2.1914 | |
| 116 | L | A | -1.5094 | |
| 117 | A | A | -1.9590 | |
| 118 | E | A | -2.8385 | |
| 119 | N | A | -2.4373 | |
| 120 | Q | A | -2.1492 | |
| 121 | K | A | -1.8492 | |
| 122 | S | A | -1.9125 | |
| 123 | C | A | -1.5182 | |
| 124 | E | A | -1.3258 | |
| 125 | P | A | -0.6630 | |
| 126 | A | A | -0.3775 | |
| 127 | V | A | 0.5677 | |
| 128 | P | A | 0.4496 | |
| 129 | F | A | 0.7006 | |
| 130 | P | A | 0.0000 | |
| 131 | C | A | 0.1129 | |
| 132 | G | A | 0.0000 | |
| 133 | R | A | -0.3247 | |
| 134 | V | A | 0.2028 | |
| 135 | S | A | 0.0554 | |
| 136 | V | A | -0.2535 | |
| 137 | S | A | -0.6387 | |
| 138 | Q | A | -1.7191 | |
| 139 | T | A | -1.0367 | |
| 140 | S | A | -1.0199 | |
| 141 | K | A | -1.4947 | |
| 142 | L | A | 0.0692 | |
| 143 | T | A | -0.9885 | |
| 144 | R | A | -2.1441 | |
| 145 | A | A | -1.3050 | |
| 146 | E | A | -1.5972 | |
| 147 | T | A | 0.2069 | |
| 148 | V | A | 1.8913 | |
| 149 | F | A | 2.1974 | |
| 150 | P | A | 0.5533 | |
| 151 | D | A | -0.6319 | |
| 152 | V | A | 0.7180 | |
| 153 | D | A | -0.3025 | |
| 154 | Y | A | 1.2264 | |
| 155 | V | A | 1.5234 | |
| 156 | N | A | -0.2348 | |
| 157 | S | A | -0.9013 | |
| 158 | T | A | -1.3619 | |
| 159 | E | A | -2.2757 | |
| 160 | A | A | -1.7709 | |
| 161 | E | A | -1.8042 | |
| 162 | T | A | 0.2428 | |
| 163 | I | A | 1.7678 | |
| 164 | L | A | 1.5417 | |
| 165 | D | A | -0.6523 | |
| 166 | N | A | -0.6771 | |
| 167 | I | A | 0.6625 | |
| 168 | T | A | -0.3139 | |
| 169 | Q | A | -1.1083 | |
| 170 | S | A | -0.9635 | |
| 171 | T | A | -0.8941 | |
| 172 | Q | A | -1.4055 | |
| 173 | S | A | -0.5329 | |
| 174 | F | A | 0.6654 | |
| 175 | N | A | -0.8558 | |
| 176 | D | A | -1.4083 | |
| 177 | F | A | 0.6513 | |
| 178 | T | A | -0.5962 | |
| 179 | R | A | -0.9284 | |
| 180 | V | A | 0.0000 | |
| 181 | V | A | -0.1467 | |
| 182 | G | A | -0.9294 | |
| 183 | G | A | -1.7737 | |
| 184 | E | A | -2.9327 | |
| 185 | D | A | -2.5467 | |
| 186 | A | A | 0.0000 | |
| 187 | K | A | -2.4609 | |
| 188 | P | A | -1.1812 | |
| 189 | G | A | -0.5488 | |
| 190 | Q | A | -0.8951 | |
| 191 | F | A | 0.0000 | |
| 192 | P | A | 0.0000 | |
| 193 | W | A | 0.0000 | |
| 194 | Q | A | 0.0000 | |
| 195 | V | A | 0.0000 | |
| 196 | V | A | 0.0000 | |
| 197 | L | A | 0.0000 | |
| 198 | N | A | -1.4616 | |
| 199 | G | A | -1.4567 | |
| 200 | K | A | -1.6760 | |
| 201 | V | A | -0.1395 | |
| 202 | D | A | -1.4201 | |
| 203 | A | A | 0.0000 | |
| 204 | F | A | -0.4142 | |
| 205 | C | A | 0.0000 | |
| 206 | G | A | 0.0000 | |
| 207 | G | A | 0.0000 | |
| 208 | S | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | 0.2842 | |
| 211 | N | A | -0.6394 | |
| 212 | E | A | -1.0988 | |
| 213 | K | A | -1.3532 | |
| 214 | W | A | -0.4733 | |
| 215 | I | A | 0.0000 | |
| 216 | V | A | 0.0000 | |
| 217 | T | A | 0.0000 | |
| 218 | A | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | H | A | -0.6556 | |
| 221 | C | A | 0.0000 | |
| 222 | V | A | -0.7018 | |
| 223 | E | A | -1.9834 | |
| 224 | T | A | -1.2845 | |
| 225 | G | A | -1.1343 | |
| 226 | V | A | -1.5586 | |
| 227 | K | A | -2.0315 | |
| 228 | I | A | 0.0000 | |
| 229 | T | A | -1.1765 | |
| 230 | V | A | 0.0000 | |
| 231 | V | A | 0.0000 | |
| 232 | A | A | 0.0000 | |
| 233 | G | A | 0.0000 | |
| 234 | E | A | -1.1410 | |
| 235 | H | A | -1.2377 | |
| 236 | N | A | -1.3630 | |
| 237 | I | A | -1.3447 | |
| 238 | E | A | -2.5679 | |
| 239 | E | A | -2.9590 | |
| 240 | T | A | -2.0927 | |
| 241 | E | A | -2.1354 | |
| 242 | H | A | -1.7876 | |
| 243 | T | A | -1.1673 | |
| 244 | E | A | -1.3557 | |
| 245 | Q | A | -1.0141 | |
| 246 | K | A | -2.3385 | |
| 247 | R | A | -1.8512 | |
| 248 | N | A | -1.5079 | |
| 249 | V | A | -0.3770 | |
| 250 | I | A | 0.3790 | |
| 251 | R | A | -0.4691 | |
| 252 | I | A | 0.3374 | |
| 253 | I | A | 0.7137 | |
| 254 | P | A | -0.3327 | |
| 255 | H | A | -0.8484 | |
| 256 | H | A | -1.6581 | |
| 257 | N | A | -2.0013 | |
| 258 | Y | A | -1.1479 | |
| 259 | N | A | -0.8946 | |
| 260 | A | A | -0.5041 | |
| 261 | A | A | 0.5091 | |
| 262 | I | A | 1.4940 | |
| 263 | N | A | 0.0665 | |
| 264 | K | A | -0.6154 | |
| 265 | Y | A | 0.0566 | |
| 266 | N | A | -0.5491 | |
| 267 | H | A | -1.0077 | |
| 268 | D | A | 0.0000 | |
| 269 | I | A | 0.3631 | |
| 270 | A | A | 0.0000 | |
| 271 | L | A | 0.7318 | |
| 272 | L | A | 0.0000 | |
| 273 | E | A | -0.5924 | |
| 274 | L | A | 0.0000 | |
| 275 | D | A | -1.7393 | |
| 276 | E | A | -2.4705 | |
| 277 | P | A | -1.3571 | |
| 278 | L | A | 0.0000 | |
| 279 | V | A | 1.3082 | |
| 280 | L | A | 0.8656 | |
| 281 | N | A | 0.4499 | |
| 282 | S | A | 0.1831 | |
| 283 | Y | A | 0.5111 | |
| 284 | V | A | 0.0000 | |
| 285 | T | A | 0.0000 | |
| 286 | P | A | 0.0000 | |
| 287 | I | A | 0.0000 | |
| 288 | C | A | 0.0000 | |
| 289 | I | A | 0.7687 | |
| 290 | A | A | -0.9387 | |
| 291 | D | A | -2.5570 | |
| 292 | K | A | -3.3017 | |
| 293 | E | A | -3.2809 | |
| 294 | Y | A | 0.0000 | |
| 295 | T | A | -1.8059 | |
| 296 | N | A | -2.2234 | |
| 297 | I | A | -0.7230 | |
| 298 | F | A | 0.0000 | |
| 299 | L | A | -0.3211 | |
| 300 | K | A | -0.8828 | |
| 301 | F | A | 1.0048 | |
| 302 | G | A | 0.2148 | |
| 303 | S | A | -0.2916 | |
| 304 | G | A | 0.0000 | |
| 305 | Y | A | -0.7205 | |
| 306 | V | A | 0.0000 | |
| 307 | S | A | 0.0000 | |
| 308 | G | A | 0.0000 | |
| 309 | W | A | 0.0000 | |
| 310 | G | A | 0.0000 | |
| 311 | R | A | -1.6951 | |
| 312 | V | A | 0.0000 | |
| 313 | F | A | -0.4778 | |
| 314 | H | A | -1.7849 | |
| 315 | K | A | -2.6273 | |
| 316 | G | A | -1.8511 | |
| 317 | R | A | -2.3041 | |
| 318 | S | A | -1.4113 | |
| 319 | A | A | 0.0000 | |
| 320 | L | A | -0.8307 | |
| 321 | V | A | -1.0397 | |
| 322 | L | A | 0.0000 | |
| 323 | Q | A | 0.0000 | |
| 324 | Y | A | -1.3259 | |
| 325 | L | A | 0.0000 | |
| 326 | R | A | -2.0263 | |
| 327 | V | A | 0.0000 | |
| 328 | P | A | -0.4543 | |
| 329 | L | A | -0.3531 | |
| 330 | V | A | -0.9785 | |
| 331 | D | A | -2.2131 | |
| 332 | R | A | -2.0171 | |
| 333 | A | A | -1.1509 | |
| 334 | T | A | -1.3416 | |
| 335 | C | A | 0.0000 | |
| 336 | L | A | -0.3899 | |
| 337 | R | A | -1.7124 | |
| 338 | S | A | -1.3166 | |
| 339 | T | A | -0.7975 | |
| 340 | K | A | -1.1802 | |
| 341 | F | A | 0.5993 | |
| 342 | T | A | 0.4238 | |
| 343 | I | A | 0.0000 | |
| 344 | Y | A | -0.0017 | |
| 345 | N | A | -1.3529 | |
| 346 | N | A | -0.7408 | |
| 347 | M | A | 0.0000 | |
| 348 | F | A | -0.3067 | |
| 349 | C | A | 0.0000 | |
| 350 | A | A | 0.0000 | |
| 351 | G | A | 0.0000 | |
| 352 | F | A | -1.2063 | |
| 353 | H | A | -2.2694 | |
| 354 | E | A | -2.7684 | |
| 355 | G | A | 0.0000 | |
| 356 | G | A | -1.3714 | |
| 357 | R | A | -1.5730 | |
| 358 | D | A | 0.0000 | |
| 359 | S | A | 0.0000 | |
| 360 | C | A | 0.0000 | |
| 361 | Q | A | -1.8497 | |
| 362 | G | A | -0.8827 | |
| 363 | D | A | 0.0000 | |
| 364 | S | A | -0.2981 | |
| 365 | G | A | 0.0000 | |
| 366 | G | A | 0.0000 | |
| 367 | P | A | 0.0000 | |
| 368 | H | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | T | A | 0.0000 | |
| 371 | E | A | -1.8218 | |
| 372 | V | A | 0.0000 | |
| 373 | E | A | -2.5537 | |
| 374 | G | A | -1.8285 | |
| 375 | T | A | 0.0000 | |
| 376 | S | A | 0.0000 | |
| 377 | F | A | 0.0000 | |
| 378 | L | A | 0.0000 | |
| 379 | T | A | 0.0000 | |
| 380 | G | A | 0.0000 | |
| 381 | I | A | 0.0000 | |
| 382 | I | A | 0.0000 | |
| 383 | S | A | 0.0000 | |
| 384 | W | A | -0.4830 | |
| 385 | G | A | -0.8317 | |
| 386 | E | A | -1.2262 | |
| 387 | E | A | -2.3582 | |
| 388 | C | A | -1.6675 | |
| 389 | A | A | -1.3696 | |
| 390 | M | A | -1.6614 | |
| 391 | K | A | -2.6441 | |
| 392 | G | A | -1.8781 | |
| 393 | K | A | -1.7193 | |
| 394 | Y | A | 0.0000 | |
| 395 | G | A | 0.0000 | |
| 396 | I | A | 0.0000 | |
| 397 | Y | A | 0.0000 | |
| 398 | T | A | -0.0224 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine