| Chain sequence(s) |
H: EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARAPYYYYYMDVWGQGTTVTVSS
L: QSALTQPASVSGSLGQSVTISCTGSSSDVGSYNLVSWYQQHPGKAPNLMIYDVSKRSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTGISTVVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2208 | |
| 2 | V | H | -1.4115 | |
| 3 | Q | H | -1.6502 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3409 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5644 | |
| 8 | G | H | -0.6402 | |
| 9 | A | H | -0.1126 | |
| 11 | E | H | -0.2422 | |
| 12 | V | H | 0.8509 | |
| 13 | K | H | -0.9545 | |
| 14 | K | H | -2.1726 | |
| 15 | P | H | -2.2745 | |
| 16 | G | H | -1.6365 | |
| 17 | S | H | -1.3065 | |
| 18 | S | H | -1.4435 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.0796 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.4805 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.6180 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0087 | |
| 27 | G | H | -1.4451 | |
| 28 | G | H | -1.1166 | |
| 29 | T | H | -0.6927 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | 0.4902 | |
| 36 | S | H | 0.8115 | |
| 37 | Y | H | 0.8026 | |
| 38 | A | H | 1.0307 | |
| 39 | I | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6297 | |
| 45 | A | H | -1.0175 | |
| 46 | P | H | -0.8399 | |
| 47 | G | H | -1.2439 | |
| 48 | Q | H | -1.7303 | |
| 49 | G | H | -1.1809 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7950 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | I | H | 1.2718 | |
| 58 | P | H | 0.9188 | |
| 59 | I | H | 2.3668 | |
| 62 | F | H | 2.6384 | |
| 63 | G | H | 0.7538 | |
| 64 | T | H | 0.6724 | |
| 65 | A | H | 0.1288 | |
| 66 | N | H | -0.1436 | |
| 67 | Y | H | -0.8847 | |
| 68 | A | H | 0.0000 | |
| 69 | Q | H | -2.6569 | |
| 70 | K | H | -2.9353 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -2.3821 | |
| 74 | G | H | -1.6273 | |
| 75 | R | H | -1.4624 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.8449 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.2299 | |
| 80 | A | H | -0.5992 | |
| 81 | D | H | -1.4088 | |
| 82 | E | H | -1.9336 | |
| 83 | S | H | -1.2950 | |
| 84 | T | H | -1.0516 | |
| 85 | S | H | -1.3469 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4596 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.5573 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.2341 | |
| 93 | S | H | -1.2492 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1759 | |
| 96 | S | H | -2.3995 | |
| 97 | E | H | -2.5837 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.9204 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1471 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.0891 | |
| 107 | A | H | 0.0000 | |
| 108 | P | H | 0.8104 | |
| 109 | Y | H | 1.6753 | |
| 110 | Y | H | 2.0171 | |
| 112 | Y | H | 1.7801 | |
| 113 | Y | H | 1.1477 | |
| 114 | Y | H | 0.6818 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.3986 | |
| 117 | V | H | -0.4776 | |
| 118 | W | H | -0.5136 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.4421 | |
| 121 | G | H | -0.7073 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.0546 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.3704 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.1355 | |
| 128 | S | H | -1.0093 | |
| 1 | Q | L | -1.7761 | |
| 2 | S | L | -0.8102 | |
| 3 | A | L | -0.5070 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.3502 | |
| 6 | Q | L | -0.3862 | |
| 7 | P | L | -0.3642 | |
| 8 | A | L | -0.4000 | |
| 9 | S | L | -0.4997 | |
| 11 | V | L | -0.1608 | |
| 12 | S | L | 0.0348 | |
| 13 | G | L | 0.2449 | |
| 14 | S | L | 0.8032 | |
| 15 | L | L | 1.2027 | |
| 16 | G | L | -0.3577 | |
| 17 | Q | L | -0.9994 | |
| 18 | S | L | -0.8210 | |
| 19 | V | L | -0.3458 | |
| 20 | T | L | -0.0809 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2763 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.5618 | |
| 25 | G | L | -0.5853 | |
| 26 | S | L | -0.7230 | |
| 27 | S | L | -0.7340 | |
| 28 | S | L | -0.4892 | |
| 29 | D | L | 0.0000 | |
| 30 | V | L | 0.0000 | |
| 31 | G | L | -1.0813 | |
| 35 | S | L | -0.6117 | |
| 36 | Y | L | -0.2951 | |
| 37 | N | L | -0.9995 | |
| 38 | L | L | 0.1472 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | H | L | -1.6160 | |
| 46 | P | L | -1.2614 | |
| 47 | G | L | -1.5808 | |
| 48 | K | L | -2.3984 | |
| 49 | A | L | -1.4177 | |
| 50 | P | L | 0.0000 | |
| 51 | N | L | -1.1688 | |
| 52 | L | L | 0.0000 | |
| 53 | M | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2300 | |
| 56 | D | L | 0.1572 | |
| 65 | V | L | 0.6221 | |
| 66 | S | L | -0.0181 | |
| 67 | K | L | -1.1081 | |
| 68 | R | L | -1.0088 | |
| 69 | S | L | -0.7878 | |
| 70 | G | L | -0.8507 | |
| 71 | V | L | -0.8963 | |
| 72 | S | L | -1.0533 | |
| 74 | N | L | -1.7048 | |
| 75 | R | L | -1.1594 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3716 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.1795 | |
| 80 | K | L | -0.8839 | |
| 83 | S | L | -0.8772 | |
| 84 | G | L | -1.2950 | |
| 85 | N | L | -1.3895 | |
| 86 | T | L | -0.8604 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.1437 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.1948 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.8749 | |
| 93 | G | L | -0.7600 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7906 | |
| 96 | A | L | -0.6237 | |
| 97 | E | L | -2.1524 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.4452 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.9888 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | Y | L | 0.5110 | |
| 108 | T | L | 0.5397 | |
| 109 | G | L | 0.7595 | |
| 113 | I | L | 1.8490 | |
| 114 | S | L | 0.8949 | |
| 115 | T | L | 0.2710 | |
| 116 | V | L | 0.0000 | |
| 117 | V | L | -0.1285 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.8293 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.0305 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.0363 | |
| 126 | V | L | 0.5420 | |
| 127 | L | L | 1.7230 |