Project name: Socazolimab

Status: done

Started: 2026-03-22 13:06:01
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Chain sequence(s) H: EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARAPYYYYYMDVWGQGTTVTVSS
L: QSALTQPASVSGSLGQSVTISCTGSSSDVGSYNLVSWYQQHPGKAPNLMIYDVSKRSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTGISTVVFGGGTKLTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-3.1759
Maximal score value
2.6384
Average score
-0.3874
Total score value
-88.3217

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.2208
2 V H -1.4115
3 Q H -1.6502
4 L H 0.0000
5 V H 0.3409
6 E H 0.0000
7 S H -0.5644
8 G H -0.6402
9 A H -0.1126
11 E H -0.2422
12 V H 0.8509
13 K H -0.9545
14 K H -2.1726
15 P H -2.2745
16 G H -1.6365
17 S H -1.3065
18 S H -1.4435
19 V H 0.0000
20 K H -2.0796
21 V H 0.0000
22 S H -0.4805
23 C H 0.0000
24 K H -0.6180
25 A H 0.0000
26 S H -1.0087
27 G H -1.4451
28 G H -1.1166
29 T H -0.6927
30 F H 0.0000
35 S H 0.4902
36 S H 0.8115
37 Y H 0.8026
38 A H 1.0307
39 I H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6297
45 A H -1.0175
46 P H -0.8399
47 G H -1.2439
48 Q H -1.7303
49 G H -1.1809
50 L H 0.0000
51 E H -0.7950
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 G H 0.0000
56 I H 0.0000
57 I H 1.2718
58 P H 0.9188
59 I H 2.3668
62 F H 2.6384
63 G H 0.7538
64 T H 0.6724
65 A H 0.1288
66 N H -0.1436
67 Y H -0.8847
68 A H 0.0000
69 Q H -2.6569
70 K H -2.9353
71 F H 0.0000
72 Q H -2.3821
74 G H -1.6273
75 R H -1.4624
76 V H 0.0000
77 T H -0.8449
78 I H 0.0000
79 T H -0.2299
80 A H -0.5992
81 D H -1.4088
82 E H -1.9336
83 S H -1.2950
84 T H -1.0516
85 S H -1.3469
86 T H 0.0000
87 A H 0.0000
88 Y H -0.4596
89 M H 0.0000
90 E H -1.5573
91 L H 0.0000
92 S H -1.2341
93 S H -1.2492
94 L H 0.0000
95 R H -3.1759
96 S H -2.3995
97 E H -2.5837
98 D H 0.0000
99 T H -0.9204
100 A H 0.0000
101 V H 0.1471
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.0891
107 A H 0.0000
108 P H 0.8104
109 Y H 1.6753
110 Y H 2.0171
112 Y H 1.7801
113 Y H 1.1477
114 Y H 0.6818
115 M H 0.0000
116 D H -0.3986
117 V H -0.4776
118 W H -0.5136
119 G H 0.0000
120 Q H -1.4421
121 G H -0.7073
122 T H 0.0000
123 T H -0.0546
124 V H 0.0000
125 T H -0.3704
126 V H 0.0000
127 S H -1.1355
128 S H -1.0093
1 Q L -1.7761
2 S L -0.8102
3 A L -0.5070
4 L L 0.0000
5 T L -0.3502
6 Q L -0.3862
7 P L -0.3642
8 A L -0.4000
9 S L -0.4997
11 V L -0.1608
12 S L 0.0348
13 G L 0.2449
14 S L 0.8032
15 L L 1.2027
16 G L -0.3577
17 Q L -0.9994
18 S L -0.8210
19 V L -0.3458
20 T L -0.0809
21 I L 0.0000
22 S L -0.2763
23 C L 0.0000
24 T L -0.5618
25 G L -0.5853
26 S L -0.7230
27 S L -0.7340
28 S L -0.4892
29 D L 0.0000
30 V L 0.0000
31 G L -1.0813
35 S L -0.6117
36 Y L -0.2951
37 N L -0.9995
38 L L 0.1472
39 V L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 H L -1.6160
46 P L -1.2614
47 G L -1.5808
48 K L -2.3984
49 A L -1.4177
50 P L 0.0000
51 N L -1.1688
52 L L 0.0000
53 M L 0.0000
54 I L 0.0000
55 Y L 0.2300
56 D L 0.1572
65 V L 0.6221
66 S L -0.0181
67 K L -1.1081
68 R L -1.0088
69 S L -0.7878
70 G L -0.8507
71 V L -0.8963
72 S L -1.0533
74 N L -1.7048
75 R L -1.1594
76 F L 0.0000
77 S L -0.3716
78 G L 0.0000
79 S L -0.1795
80 K L -0.8839
83 S L -0.8772
84 G L -1.2950
85 N L -1.3895
86 T L -0.8604
87 A L 0.0000
88 S L -0.1437
89 L L 0.0000
90 T L -0.1948
91 I L 0.0000
92 S L -0.8749
93 G L -0.7600
94 L L 0.0000
95 Q L -0.7906
96 A L -0.6237
97 E L -2.1524
98 D L 0.0000
99 E L -1.4452
100 A L 0.0000
101 D L -0.9888
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 S L 0.0000
106 S L 0.0000
107 Y L 0.5110
108 T L 0.5397
109 G L 0.7595
113 I L 1.8490
114 S L 0.8949
115 T L 0.2710
116 V L 0.0000
117 V L -0.1285
118 F L 0.0000
119 G L 0.0000
120 G L -0.8293
121 G L 0.0000
122 T L 0.0000
123 K L -1.0305
124 L L 0.0000
125 T L -0.0363
126 V L 0.5420
127 L L 1.7230
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Laboratory of Theory of Biopolymers 2018