Project name: query_structure

Status: done

Started: 2026-03-16 23:45:56
Settings
Chain sequence(s) A: GTIPCGESCVYIPCITSALGCSCKKKVCYKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:25)
Show buried residues

Minimal score value
-2.4785
Maximal score value
2.2245
Average score
0.1573
Total score value
4.8761

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7223
2 T A 0.2010
3 I A 1.2583
4 P A 0.2754
5 C A 0.3763
6 G A -0.1199
7 E A 0.0735
8 S A 0.2471
9 C A 0.8407
10 V A 1.8265
11 Y A 2.2245
12 I A 1.7715
13 P A 1.1690
14 C A 0.0000
15 I A 2.0789
16 T A 1.2233
17 S A 0.8051
18 A A 1.0251
19 L A 1.4911
20 G A 0.0157
21 C A 0.0000
22 S A -0.6472
23 C A -0.6060
24 K A -1.9681
25 K A -2.4785
26 K A -1.6222
27 V A -0.9476
28 C A 0.0000
29 Y A -0.6930
30 K A -0.7522
31 N A -1.4699
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Laboratory of Theory of Biopolymers 2018