Project name: query_structure

Status: done

Started: 2026-03-16 23:32:10
Settings
Chain sequence(s) A: GSIPCGESCVYIPCITSIVGCSCKSKVCYKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-1.3886
Maximal score value
3.0118
Average score
0.5651
Total score value
17.5166

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3489
2 S A -0.1275
3 I A 1.2316
4 P A 0.3419
5 C A 0.4400
6 G A -0.0845
7 E A 0.1230
8 S A 0.5267
9 C A 1.1570
10 V A 2.0410
11 Y A 2.2177
12 I A 1.8286
13 P A 1.1634
14 C A 0.0000
15 I A 2.5579
16 T A 1.9093
17 S A 1.7764
18 I A 3.0118
19 V A 2.4616
20 G A 0.6440
21 C A 0.0000
22 S A -0.0862
23 C A -0.0131
24 K A -0.9312
25 S A -0.8636
26 K A -0.8117
27 V A -0.3390
28 C A 0.0000
29 Y A -0.3123
30 K A -0.6087
31 N A -1.3886
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Laboratory of Theory of Biopolymers 2018