| Chain sequence(s) |
B: LEEALELAKELSKSKNPNARAYARTAAELVRIALEKGYKDPKEAPGAEFAIRLLEKALEAAKDDPEAKKLAEEAIEALRAGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:02)
[INFO] Main: Simulation completed successfully. (00:04:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 0.0000 | |
| 2 | E | B | -1.8229 | |
| 3 | E | B | -2.0772 | |
| 4 | A | B | 0.0000 | |
| 5 | L | B | -2.1083 | |
| 6 | E | B | -2.9158 | |
| 7 | L | B | -2.3151 | |
| 8 | A | B | 0.0000 | |
| 9 | K | B | -3.4733 | |
| 10 | E | B | -3.4322 | |
| 11 | L | B | 0.0000 | |
| 12 | S | B | 0.0000 | |
| 13 | K | B | -3.3985 | |
| 14 | S | B | -3.0396 | |
| 15 | K | B | -2.7309 | |
| 16 | N | B | -2.5567 | |
| 17 | P | B | -1.9071 | |
| 18 | N | B | -2.2228 | |
| 19 | A | B | 0.0000 | |
| 20 | R | B | -2.9435 | |
| 21 | A | B | -1.6066 | |
| 22 | Y | B | -1.3423 | |
| 23 | A | B | 0.0000 | |
| 24 | R | B | -2.8102 | |
| 25 | T | B | -1.1417 | |
| 26 | A | B | 0.0000 | |
| 27 | A | B | 0.0000 | |
| 28 | E | B | -1.4455 | |
| 29 | L | B | -0.4445 | |
| 30 | V | B | 0.0000 | |
| 31 | R | B | -1.5516 | |
| 32 | I | B | -0.7921 | |
| 33 | A | B | 0.0000 | |
| 34 | L | B | -1.9955 | |
| 35 | E | B | -2.6592 | |
| 36 | K | B | -2.7553 | |
| 37 | G | B | -2.2151 | |
| 38 | Y | B | -2.5815 | |
| 39 | K | B | -3.5066 | |
| 40 | D | B | -3.8382 | |
| 41 | P | B | 0.0000 | |
| 42 | K | B | -4.0412 | |
| 43 | E | B | -3.6643 | |
| 44 | A | B | 0.0000 | |
| 45 | P | B | -1.0203 | |
| 46 | G | B | -0.6066 | |
| 47 | A | B | 0.0000 | |
| 48 | E | B | -2.0278 | |
| 49 | F | B | 0.2307 | |
| 50 | A | B | 0.0000 | |
| 51 | I | B | -1.7790 | |
| 52 | R | B | -1.9661 | |
| 53 | L | B | 0.0000 | |
| 54 | L | B | 0.0000 | |
| 55 | E | B | -2.8203 | |
| 56 | K | B | -2.5199 | |
| 57 | A | B | 0.0000 | |
| 58 | L | B | -3.1391 | |
| 59 | E | B | -3.3648 | |
| 60 | A | B | -2.6249 | |
| 61 | A | B | 0.0000 | |
| 62 | K | B | -3.7843 | |
| 63 | D | B | -3.3888 | |
| 64 | D | B | -2.9370 | |
| 65 | P | B | -2.6288 | |
| 66 | E | B | -3.3954 | |
| 67 | A | B | 0.0000 | |
| 68 | K | B | -3.7750 | |
| 69 | K | B | -3.3181 | |
| 70 | L | B | -2.8373 | |
| 71 | A | B | 0.0000 | |
| 72 | E | B | -3.6399 | |
| 73 | E | B | -3.1910 | |
| 74 | A | B | 0.0000 | |
| 75 | I | B | 0.0000 | |
| 76 | E | B | -3.3138 | |
| 77 | A | B | -2.2688 | |
| 78 | L | B | 0.0000 | |
| 79 | R | B | -3.3326 | |
| 80 | A | B | -1.9655 | |
| 81 | G | B | -2.2317 | |
| 82 | S | B | -1.4225 | |
| 83 | G | B | -0.2257 | |
| 84 | C | B | 0.4795 |