Project name: 524

Status: done

Started: 2025-06-26 11:07:08
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGYTNRLKCMGWFRQAPGKERELASISTGTGNTYYADSVKGRFTISRDNSKNTLYLQMNSLKAEDTAVYYCAADVRPDGTTCHYNSRGQGTLVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:06)
Show buried residues

Minimal score value
-4.2255
Maximal score value
1.6705
Average score
-1.0595
Total score value
-128.1951

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9837
2 V H -1.5595
3 Q H -1.6095
4 L H 0.0000
5 L H 0.6769
6 E H 0.0209
7 S H -0.3570
8 G H -0.7020
9 G H 0.0727
11 G H 0.7558
12 L H 1.4264
13 V H -0.0581
14 Q H -1.3660
15 P H -1.5347
16 G H -1.6036
17 G H -1.0641
18 S H -1.2786
19 L H -1.1460
20 R H -2.3583
21 L H 0.0000
22 S H -0.5286
23 C H 0.0000
24 A H -0.3782
25 A H 0.0000
26 S H -1.0549
27 G H -1.0941
28 Y H -1.0753
29 T H -1.4066
30 N H -2.7536
35 R H -3.0983
36 L H -1.7930
37 K H -1.7024
38 C H -0.9018
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H -0.9373
43 R H -1.3441
44 Q H -2.2909
45 A H -1.7404
46 P H -1.5156
47 G H -2.0445
48 K H -3.7954
49 E H -4.2255
50 R H -3.7765
51 E H -2.2405
53 L H -0.3364
54 A H 0.0000
55 S H 0.0000
56 I H 0.0000
57 S H -0.7988
58 T H -1.4727
59 G H -1.2762
62 T H -0.8879
63 G H -1.2413
64 N H -1.3520
65 T H -0.1024
66 Y H 0.6803
67 Y H -0.2315
68 A H -1.0034
69 D H -2.3155
70 S H -1.8829
71 V H 0.0000
72 K H -2.4373
74 G H -1.8270
75 R H -1.8255
76 F H 0.0000
77 T H -0.9915
78 I H 0.0000
79 S H -0.8528
80 R H -1.7428
81 D H -2.2779
82 N H -2.7521
83 S H -2.1297
84 K H -2.8975
85 N H -2.5798
86 T H -1.4559
87 L H 0.0000
88 Y H -0.8379
89 L H 0.0000
90 Q H -1.8542
91 M H 0.0000
92 N H -2.2170
93 S H -1.6154
94 L H 0.0000
95 K H -2.6032
96 A H -1.8309
97 E H -2.3165
98 D H 0.0000
99 T H -0.4487
100 A H 0.0000
101 V H 0.3835
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 D H 0.0000
108 V H 0.0000
109 R H -3.6899
110 P H -3.0753
111 D H -2.9076
111A G H -1.4128
112A T H -1.0614
112 T H -1.3118
113 C H -0.7185
114 H H -2.3281
115 Y H -1.7151
116 N H -2.2544
117 S H -1.9372
118 R H -2.0570
119 G H 0.0000
120 Q H -1.4343
121 G H -0.3714
122 T H 0.4024
123 L H 1.6705
124 V H 0.0000
125 T H 0.3560
126 V H 0.0000
127 S H -0.7929
128 S H -0.8596
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Laboratory of Theory of Biopolymers 2018