| Chain sequence(s) |
A: GPLPLGPEPEIRSTEDYVTPTDLLYVAETDLITETGHPTKDIVVDGKVAVPRVSAYDWRVFKLTLPDPNTLPLPSADAVDPSTHIRIWRLRAFEIGVGGALGTGTYGHANFNAFGDVTNPTAYQHETADDTQALSWTPVRLQQYIIGDLPPLGKYVAPAPPAPGLPPGAEPPLTVVHTVIQHGDRADIGFGAKDYKALLPRKDDVPDIILDTKTVVVDYEGMRADPYGRRMFDYDSYTSSSASRTLRRDGPELRPLPDSPPPSPLYVRPPPTSPYAVLPSTDYFTIPDAGAITASQELFNKPRFFEKTPGKNNGILWHNQLYITVLDNSRAAITTNTTQVSTPAPNVYDPANYVTSTTYTREYRLSLIVQLCTIPLTPEILEELRRLDPSILVDANLPEIPPVERPDPYAGKKFLEIDLTDKLSRDLSKTPLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1962 | |
| 2 | P | A | 0.4492 | |
| 3 | L | A | 1.5306 | |
| 4 | P | A | 0.9098 | |
| 5 | L | A | 1.1694 | |
| 6 | G | A | -0.1918 | |
| 7 | P | A | -1.3730 | |
| 8 | E | A | -2.3074 | |
| 9 | P | A | -2.2040 | |
| 10 | E | A | -2.6136 | |
| 11 | I | A | -1.6966 | |
| 12 | R | A | -2.3755 | |
| 13 | S | A | -2.1478 | |
| 14 | T | A | 0.0000 | |
| 15 | E | A | -2.6171 | |
| 16 | D | A | -2.7617 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.7053 | |
| 20 | P | A | -0.8033 | |
| 21 | T | A | -1.0776 | |
| 22 | D | A | -1.8593 | |
| 23 | L | A | 0.0000 | |
| 24 | L | A | -0.8419 | |
| 25 | Y | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.3626 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.4529 | |
| 31 | L | A | -0.0008 | |
| 32 | I | A | -0.0422 | |
| 33 | T | A | -0.3052 | |
| 34 | E | A | -0.4825 | |
| 35 | T | A | -0.3280 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.8472 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4002 | |
| 40 | K | A | -2.0075 | |
| 41 | D | A | -0.8941 | |
| 42 | I | A | 1.1704 | |
| 43 | V | A | 2.0860 | |
| 44 | V | A | 1.5512 | |
| 45 | D | A | -1.0296 | |
| 46 | G | A | -0.6619 | |
| 47 | K | A | -0.4605 | |
| 48 | V | A | 1.5058 | |
| 49 | A | A | 1.3832 | |
| 50 | V | A | 1.0382 | |
| 51 | P | A | -0.2345 | |
| 52 | R | A | -1.2343 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2991 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | -1.1095 | |
| 67 | D | A | -0.6673 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.7750 | |
| 70 | T | A | -0.4164 | |
| 71 | L | A | -0.0604 | |
| 72 | P | A | -0.1956 | |
| 73 | L | A | -0.0871 | |
| 74 | P | A | -0.3489 | |
| 75 | S | A | -0.3844 | |
| 76 | A | A | -0.3411 | |
| 77 | D | A | -1.0452 | |
| 78 | A | A | -0.5701 | |
| 79 | V | A | -0.7710 | |
| 80 | D | A | -1.7600 | |
| 81 | P | A | -1.3475 | |
| 82 | S | A | -1.0669 | |
| 83 | T | A | -0.7475 | |
| 84 | H | A | -0.8852 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | -0.6368 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3126 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.7179 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | E | A | -1.2213 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.0582 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.5887 | |
| 99 | G | A | -0.4713 | |
| 100 | A | A | 0.1060 | |
| 101 | L | A | 0.5449 | |
| 102 | G | A | 0.3071 | |
| 103 | T | A | 0.1515 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.0332 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6007 | |
| 108 | H | A | -1.1824 | |
| 109 | A | A | -1.0428 | |
| 110 | N | A | -2.2391 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | -1.1029 | |
| 116 | D | A | -1.1689 | |
| 117 | V | A | -0.4105 | |
| 118 | T | A | -1.0772 | |
| 119 | N | A | -1.6893 | |
| 120 | P | A | -1.0204 | |
| 121 | T | A | -0.6423 | |
| 122 | A | A | -0.4837 | |
| 123 | Y | A | -0.3978 | |
| 124 | Q | A | -1.6801 | |
| 125 | H | A | -1.6396 | |
| 126 | E | A | -2.2312 | |
| 127 | T | A | -1.5986 | |
| 128 | A | A | -1.1622 | |
| 129 | D | A | -2.4357 | |
| 130 | D | A | -2.0205 | |
| 131 | T | A | -1.7708 | |
| 132 | Q | A | -1.9237 | |
| 133 | A | A | -0.9408 | |
| 134 | L | A | -0.4320 | |
| 135 | S | A | -0.3616 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.3156 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | R | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | Q | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.1517 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1388 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.0416 | |
| 155 | Y | A | 0.3239 | |
| 156 | V | A | 1.1264 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | 0.4651 | |
| 159 | A | A | 0.5439 | |
| 160 | P | A | -0.2675 | |
| 161 | P | A | -0.3679 | |
| 162 | A | A | -0.1961 | |
| 163 | P | A | -0.3399 | |
| 164 | G | A | -0.2705 | |
| 165 | L | A | 0.1045 | |
| 166 | P | A | -0.3645 | |
| 167 | P | A | -0.6043 | |
| 168 | G | A | -0.6554 | |
| 169 | A | A | -0.6676 | |
| 170 | E | A | -1.0361 | |
| 171 | P | A | -0.4857 | |
| 172 | P | A | 0.1350 | |
| 173 | L | A | 1.4545 | |
| 174 | T | A | 1.4880 | |
| 175 | V | A | 1.9912 | |
| 176 | V | A | 0.8899 | |
| 177 | H | A | -0.3574 | |
| 178 | T | A | -0.1347 | |
| 179 | V | A | -0.3561 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.9298 | |
| 182 | H | A | -1.0459 | |
| 183 | G | A | -0.6361 | |
| 184 | D | A | -0.6461 | |
| 185 | R | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.3989 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4450 | |
| 190 | F | A | -0.1034 | |
| 191 | G | A | -0.2860 | |
| 192 | A | A | -0.1305 | |
| 193 | K | A | -0.2618 | |
| 194 | D | A | -1.2782 | |
| 195 | Y | A | 0.0000 | |
| 196 | K | A | -2.9715 | |
| 197 | A | A | -1.2940 | |
| 198 | L | A | -0.8231 | |
| 199 | L | A | 0.0000 | |
| 200 | P | A | -1.6493 | |
| 201 | R | A | -2.0617 | |
| 202 | K | A | -2.6024 | |
| 203 | D | A | -1.8371 | |
| 204 | D | A | -1.2148 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.8208 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -2.1542 | |
| 211 | D | A | -2.9283 | |
| 212 | T | A | -1.9055 | |
| 213 | K | A | -1.5590 | |
| 214 | T | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | V | A | 0.1774 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | Y | A | -1.0781 | |
| 220 | E | A | -2.4052 | |
| 221 | G | A | -1.7847 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.6580 | |
| 224 | A | A | -1.6119 | |
| 225 | D | A | -1.4593 | |
| 226 | P | A | -1.1516 | |
| 227 | Y | A | -0.7606 | |
| 228 | G | A | -1.0119 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.3809 | |
| 231 | M | A | -0.3235 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.4743 | |
| 234 | Y | A | 0.1054 | |
| 235 | D | A | -0.3372 | |
| 236 | S | A | -0.0934 | |
| 237 | Y | A | 0.0187 | |
| 238 | T | A | 0.0048 | |
| 239 | S | A | -0.2786 | |
| 240 | S | A | -0.5983 | |
| 241 | S | A | -0.7828 | |
| 242 | A | A | -0.9071 | |
| 243 | S | A | -1.2902 | |
| 244 | R | A | -2.2025 | |
| 245 | T | A | -0.8918 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.1323 | |
| 250 | G | A | -0.8413 | |
| 251 | P | A | -0.6766 | |
| 252 | E | A | -0.7389 | |
| 253 | L | A | 0.0988 | |
| 254 | R | A | -1.2803 | |
| 255 | P | A | -1.0889 | |
| 256 | L | A | -0.0656 | |
| 257 | P | A | -0.9873 | |
| 258 | D | A | -2.1048 | |
| 259 | S | A | -1.1651 | |
| 260 | P | A | -1.0039 | |
| 261 | P | A | -0.6085 | |
| 262 | P | A | -0.2123 | |
| 263 | S | A | -0.0267 | |
| 264 | P | A | 0.6507 | |
| 265 | L | A | 1.6880 | |
| 266 | Y | A | 1.2975 | |
| 267 | V | A | 1.0720 | |
| 268 | R | A | -0.7453 | |
| 269 | P | A | -0.1258 | |
| 270 | P | A | -0.5585 | |
| 271 | P | A | -0.3331 | |
| 272 | T | A | -0.2030 | |
| 273 | S | A | 0.0596 | |
| 274 | P | A | 0.3434 | |
| 275 | Y | A | 1.0643 | |
| 276 | A | A | 0.8824 | |
| 277 | V | A | 1.9307 | |
| 278 | L | A | 1.3465 | |
| 279 | P | A | 0.0884 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4785 | |
| 282 | D | A | -0.9068 | |
| 283 | Y | A | 0.6717 | |
| 284 | F | A | 0.2526 | |
| 285 | T | A | -0.3394 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -0.9571 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -0.4421 | |
| 291 | A | A | -0.0517 | |
| 292 | I | A | 0.2080 | |
| 293 | T | A | -0.0235 | |
| 294 | A | A | -0.1049 | |
| 295 | S | A | -0.4696 | |
| 296 | Q | A | -0.5967 | |
| 297 | E | A | -0.6604 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7236 | |
| 301 | K | A | -1.8183 | |
| 302 | P | A | -0.9452 | |
| 303 | R | A | -0.7600 | |
| 304 | F | A | -0.4839 | |
| 305 | F | A | -1.1467 | |
| 306 | E | A | -2.4855 | |
| 307 | K | A | -2.8770 | |
| 308 | T | A | -1.6313 | |
| 309 | P | A | -1.2238 | |
| 310 | G | A | -1.4629 | |
| 311 | K | A | -1.9839 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.4333 | |
| 319 | N | A | -0.5194 | |
| 320 | Q | A | -0.3943 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | A | A | 0.2465 | |
| 333 | I | A | 0.2809 | |
| 334 | T | A | -0.1273 | |
| 335 | T | A | -0.2999 | |
| 336 | N | A | -0.5969 | |
| 337 | T | A | 0.0192 | |
| 338 | T | A | 0.2998 | |
| 339 | Q | A | 0.1613 | |
| 340 | V | A | 1.6690 | |
| 341 | S | A | 0.5986 | |
| 342 | T | A | 0.0283 | |
| 343 | P | A | 0.1629 | |
| 344 | A | A | 0.2097 | |
| 345 | P | A | -0.1246 | |
| 346 | N | A | -0.3002 | |
| 347 | V | A | 1.4903 | |
| 348 | Y | A | 1.3907 | |
| 349 | D | A | 0.1226 | |
| 350 | P | A | 0.2127 | |
| 351 | A | A | 0.4679 | |
| 352 | N | A | 0.0000 | |
| 353 | Y | A | 1.1104 | |
| 354 | V | A | 1.8540 | |
| 355 | T | A | 0.3374 | |
| 356 | S | A | -0.1327 | |
| 357 | T | A | -0.3219 | |
| 358 | T | A | -0.1683 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.3180 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.6301 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -1.5177 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | T | A | -0.2504 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.5634 | |
| 376 | L | A | -0.4961 | |
| 377 | T | A | -0.8936 | |
| 378 | P | A | -1.4890 | |
| 379 | E | A | -2.4240 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -1.6754 | |
| 382 | E | A | -2.9374 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.3261 | |
| 386 | R | A | -1.8878 | |
| 387 | L | A | -1.0180 | |
| 388 | D | A | -1.1844 | |
| 389 | P | A | -1.2988 | |
| 390 | S | A | -0.6940 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.5043 | |
| 394 | D | A | -1.0282 | |
| 395 | A | A | 0.0000 | |
| 396 | N | A | -1.5130 | |
| 397 | L | A | -1.2288 | |
| 398 | P | A | -1.3770 | |
| 399 | E | A | -1.9317 | |
| 400 | I | A | -0.6030 | |
| 401 | P | A | -0.4569 | |
| 402 | P | A | -0.3850 | |
| 403 | V | A | 0.4549 | |
| 404 | E | A | -1.5113 | |
| 405 | R | A | -1.4175 | |
| 406 | P | A | -1.2324 | |
| 407 | D | A | -1.5522 | |
| 408 | P | A | -0.8937 | |
| 409 | Y | A | -0.8374 | |
| 410 | A | A | -1.0212 | |
| 411 | G | A | -1.3262 | |
| 412 | K | A | -1.8939 | |
| 413 | K | A | -2.3752 | |
| 414 | F | A | -1.3108 | |
| 415 | L | A | -1.0196 | |
| 416 | E | A | -2.1781 | |
| 417 | I | A | -1.6199 | |
| 418 | D | A | -2.6480 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8707 | |
| 421 | D | A | -2.7524 | |
| 422 | K | A | -2.5817 | |
| 423 | L | A | -1.5634 | |
| 424 | S | A | -1.9774 | |
| 425 | R | A | -2.3684 | |
| 426 | D | A | -2.3102 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.5525 | |
| 429 | K | A | -2.5254 | |
| 430 | T | A | -1.4029 | |
| 431 | P | A | -0.8879 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.3128 | |
| 435 | L | A | 0.0733 | |
| 436 | Y | A | -0.0328 | |
| 437 | L | A | 0.2655 | |
| 438 | N | A | -1.3634 | |
| 439 | R | A | -1.7931 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine