| Chain sequence(s) |
H: QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVINWFDPWGQGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQDISSWLAWYQHKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPYTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4248 | |
| 2 | V | H | -1.0474 | |
| 3 | Q | H | -1.4133 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.1020 | |
| 6 | Q | H | 0.0000 | |
| 7 | W | H | 0.3593 | |
| 8 | G | H | 0.2966 | |
| 9 | A | H | 0.5603 | |
| 11 | G | H | 0.9823 | |
| 12 | L | H | 1.3418 | |
| 13 | L | H | -0.1732 | |
| 14 | K | H | -1.4266 | |
| 15 | P | H | -1.2792 | |
| 16 | S | H | -1.2480 | |
| 17 | E | H | -1.8076 | |
| 18 | T | H | -1.3113 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.7716 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.2159 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0000 | |
| 25 | V | H | 0.0000 | |
| 26 | Y | H | -0.3209 | |
| 27 | G | H | -0.7288 | |
| 28 | G | H | -0.8287 | |
| 29 | S | H | -0.6020 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.5355 | |
| 36 | G | H | -0.3350 | |
| 37 | Y | H | 0.4694 | |
| 38 | Y | H | 0.7145 | |
| 39 | W | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6345 | |
| 45 | P | H | -0.7461 | |
| 46 | P | H | -0.8445 | |
| 47 | G | H | -1.4622 | |
| 48 | K | H | -2.3280 | |
| 49 | G | H | -1.5341 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0094 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.2549 | |
| 58 | H | H | -0.8429 | |
| 59 | S | H | -0.6513 | |
| 63 | G | H | -0.6602 | |
| 64 | S | H | -0.4844 | |
| 65 | T | H | -0.3338 | |
| 66 | N | H | -0.4145 | |
| 67 | Y | H | -0.5375 | |
| 68 | N | H | -0.8300 | |
| 69 | P | H | -1.1071 | |
| 70 | S | H | -0.8657 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.9327 | |
| 74 | S | H | -1.2386 | |
| 75 | R | H | -1.3010 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9987 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5219 | |
| 80 | V | H | -0.6359 | |
| 81 | D | H | -1.4056 | |
| 82 | T | H | -1.3429 | |
| 83 | S | H | -1.3630 | |
| 84 | K | H | -2.1561 | |
| 85 | N | H | -1.5308 | |
| 86 | Q | H | -1.2453 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.4406 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.5151 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0672 | |
| 93 | S | H | -0.9825 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5266 | |
| 96 | A | H | -0.1915 | |
| 97 | A | H | 0.0190 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.4067 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6655 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0697 | |
| 107 | V | H | 0.0000 | |
| 108 | I | H | 0.5943 | |
| 109 | N | H | -0.0523 | |
| 114 | W | H | 0.1764 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.4759 | |
| 117 | P | H | -0.8084 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8628 | |
| 121 | G | H | -0.6107 | |
| 122 | T | H | 0.4662 | |
| 123 | L | H | 1.4067 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.6085 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.3033 | |
| 128 | S | H | -0.4962 | |
| 1 | D | L | -1.9706 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2511 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4002 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7089 | |
| 8 | P | L | -0.5834 | |
| 9 | S | L | -0.9441 | |
| 10 | S | L | -1.1928 | |
| 11 | V | L | -0.8508 | |
| 12 | S | L | -1.1722 | |
| 13 | A | L | -1.1261 | |
| 14 | S | L | -0.9522 | |
| 15 | V | L | -0.1039 | |
| 16 | G | L | -0.7914 | |
| 17 | D | L | -1.9118 | |
| 18 | R | L | -2.3417 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6475 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8254 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.9228 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.2361 | |
| 27 | Q | L | -2.7008 | |
| 28 | D | L | -2.7885 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.0886 | |
| 37 | S | L | -0.5644 | |
| 38 | W | L | -0.1483 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7052 | |
| 44 | H | L | -1.0793 | |
| 45 | K | L | -1.4706 | |
| 46 | P | L | -1.0713 | |
| 47 | G | L | -1.6596 | |
| 48 | K | L | -2.5578 | |
| 49 | A | L | -1.6655 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1931 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.3277 | |
| 56 | A | L | 0.0612 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.1961 | |
| 66 | S | L | 0.0908 | |
| 67 | L | L | 0.2870 | |
| 68 | Q | L | -0.2467 | |
| 69 | S | L | -0.4306 | |
| 70 | G | L | -0.5894 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.4347 | |
| 74 | S | L | -0.4761 | |
| 75 | R | L | -0.8510 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3379 | |
| 78 | G | L | -0.2365 | |
| 79 | S | L | -0.6488 | |
| 80 | G | L | -1.0362 | |
| 83 | S | L | -1.2240 | |
| 84 | G | L | -1.7173 | |
| 85 | T | L | -2.2228 | |
| 86 | D | L | -2.3300 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7368 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4390 | |
| 93 | S | L | -1.2469 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7302 | |
| 96 | P | L | -1.0010 | |
| 97 | E | L | -1.4949 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.0662 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0172 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | N | L | -0.4260 | |
| 109 | S | L | 0.1377 | |
| 114 | F | L | 0.9389 | |
| 115 | P | L | 0.0000 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.6368 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.5801 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.0165 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.6645 | |
| 126 | I | L | -0.9320 | |
| 127 | K | L | -1.6790 |