Project name: Zanolimumab

Status: done

Started: 2026-03-23 07:19:44
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Chain sequence(s) H: QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVINWFDPWGQGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQDISSWLAWYQHKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPYTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-2.9228
Maximal score value
1.4067
Average score
-0.5379
Total score value
-119.4092

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4248
2 V H -1.0474
3 Q H -1.4133
4 L H 0.0000
5 Q H -1.1020
6 Q H 0.0000
7 W H 0.3593
8 G H 0.2966
9 A H 0.5603
11 G H 0.9823
12 L H 1.3418
13 L H -0.1732
14 K H -1.4266
15 P H -1.2792
16 S H -1.2480
17 E H -1.8076
18 T H -1.3113
19 L H 0.0000
20 S H -0.7716
21 L H 0.0000
22 T H -0.2159
23 C H 0.0000
24 A H 0.0000
25 V H 0.0000
26 Y H -0.3209
27 G H -0.7288
28 G H -0.8287
29 S H -0.6020
30 F H 0.0000
35 S H -0.5355
36 G H -0.3350
37 Y H 0.4694
38 Y H 0.7145
39 W H 0.0000
40 S H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H -0.6345
45 P H -0.7461
46 P H -0.8445
47 G H -1.4622
48 K H -2.3280
49 G H -1.5341
50 L H 0.0000
51 E H -1.0094
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 E H 0.0000
56 I H 0.0000
57 N H -0.2549
58 H H -0.8429
59 S H -0.6513
63 G H -0.6602
64 S H -0.4844
65 T H -0.3338
66 N H -0.4145
67 Y H -0.5375
68 N H -0.8300
69 P H -1.1071
70 S H -0.8657
71 L H 0.0000
72 K H -1.9327
74 S H -1.2386
75 R H -1.3010
76 V H 0.0000
77 T H -0.9987
78 I H 0.0000
79 S H -0.5219
80 V H -0.6359
81 D H -1.4056
82 T H -1.3429
83 S H -1.3630
84 K H -2.1561
85 N H -1.5308
86 Q H -1.2453
87 F H 0.0000
88 S H -0.4406
89 L H 0.0000
90 K H -1.5151
91 L H 0.0000
92 S H -1.0672
93 S H -0.9825
94 V H 0.0000
95 T H -0.5266
96 A H -0.1915
97 A H 0.0190
98 D H 0.0000
99 T H 0.4067
100 A H 0.0000
101 V H 0.6655
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0697
107 V H 0.0000
108 I H 0.5943
109 N H -0.0523
114 W H 0.1764
115 F H 0.0000
116 D H -0.4759
117 P H -0.8084
118 W H 0.0000
119 G H 0.0000
120 Q H -1.8628
121 G H -0.6107
122 T H 0.4662
123 L H 1.4067
124 V H 0.0000
125 T H 0.6085
126 V H 0.0000
127 S H -0.3033
128 S H -0.4962
1 D L -1.9706
2 I L 0.0000
3 Q L -2.2511
4 M L 0.0000
5 T L -1.4002
6 Q L 0.0000
7 S L -0.7089
8 P L -0.5834
9 S L -0.9441
10 S L -1.1928
11 V L -0.8508
12 S L -1.1722
13 A L -1.1261
14 S L -0.9522
15 V L -0.1039
16 G L -0.7914
17 D L -1.9118
18 R L -2.3417
19 V L 0.0000
20 T L -0.6475
21 I L 0.0000
22 T L -0.8254
23 C L 0.0000
24 R L -2.9228
25 A L 0.0000
26 S L -2.2361
27 Q L -2.7008
28 D L -2.7885
29 I L 0.0000
36 S L -1.0886
37 S L -0.5644
38 W L -0.1483
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7052
44 H L -1.0793
45 K L -1.4706
46 P L -1.0713
47 G L -1.6596
48 K L -2.5578
49 A L -1.6655
50 P L 0.0000
51 K L -1.1931
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.3277
56 A L 0.0612
57 A L 0.0000
65 S L -0.1961
66 S L 0.0908
67 L L 0.2870
68 Q L -0.2467
69 S L -0.4306
70 G L -0.5894
71 V L 0.0000
72 P L -0.4347
74 S L -0.4761
75 R L -0.8510
76 F L 0.0000
77 S L -0.3379
78 G L -0.2365
79 S L -0.6488
80 G L -1.0362
83 S L -1.2240
84 G L -1.7173
85 T L -2.2228
86 D L -2.3300
87 F L 0.0000
88 T L -0.7368
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.4390
93 S L -1.2469
94 L L 0.0000
95 Q L -0.7302
96 P L -1.0010
97 E L -1.4949
98 D L 0.0000
99 F L -0.0662
100 A L 0.0000
101 T L -1.0172
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 A L 0.0000
108 N L -0.4260
109 S L 0.1377
114 F L 0.9389
115 P L 0.0000
116 Y L 0.0000
117 T L -0.6368
118 F L 0.0000
119 G L 0.0000
120 Q L -1.5801
121 G L 0.0000
122 T L 0.0000
123 K L -2.0165
124 L L 0.0000
125 E L -1.6645
126 I L -0.9320
127 K L -1.6790
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Laboratory of Theory of Biopolymers 2018