| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYIITYGETGGSWYSSQEFAVPGSKSTATISGLKPGVDYTITVYASMPGSWYYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5223 | |
| 2 | S | A | 0.0085 | |
| 3 | D | A | -0.6880 | |
| 4 | V | A | -0.4796 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5647 | |
| 7 | D | A | -3.5429 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1318 | |
| 10 | V | A | 0.1478 | |
| 11 | V | A | 1.5715 | |
| 12 | A | A | 0.9218 | |
| 13 | A | A | 0.3326 | |
| 14 | T | A | -0.3353 | |
| 15 | P | A | -1.1261 | |
| 16 | T | A | -1.0098 | |
| 17 | S | A | -0.5221 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.8047 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1784 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3326 | |
| 24 | A | A | -1.8284 | |
| 25 | P | A | -0.7137 | |
| 26 | A | A | 0.2518 | |
| 27 | V | A | 0.3028 | |
| 28 | T | A | -0.2980 | |
| 29 | V | A | -0.7727 | |
| 30 | D | A | -1.5383 | |
| 31 | F | A | -0.5055 | |
| 32 | Y | A | 0.0000 | |
| 33 | I | A | 0.2741 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.8063 | |
| 37 | G | A | -1.0673 | |
| 38 | E | A | -2.0002 | |
| 39 | T | A | -1.3806 | |
| 40 | G | A | -0.9776 | |
| 41 | G | A | -0.8176 | |
| 42 | S | A | 0.2395 | |
| 43 | W | A | 1.1942 | |
| 44 | Y | A | 1.4691 | |
| 45 | S | A | 0.0589 | |
| 46 | S | A | -0.5373 | |
| 47 | Q | A | -1.4921 | |
| 48 | E | A | -1.9433 | |
| 49 | F | A | -0.4222 | |
| 50 | A | A | 0.1607 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -0.9122 | |
| 53 | G | A | -1.1040 | |
| 54 | S | A | -1.3119 | |
| 55 | K | A | -1.9899 | |
| 56 | S | A | -1.3791 | |
| 57 | T | A | -0.7571 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2614 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6532 | |
| 62 | G | A | -1.0309 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.4268 | |
| 65 | P | A | -1.6669 | |
| 66 | G | A | -1.4565 | |
| 67 | V | A | -1.5296 | |
| 68 | D | A | -2.2587 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.1624 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.2293 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.8778 | |
| 75 | A | A | 0.0000 | |
| 76 | S | A | 0.0000 | |
| 77 | M | A | 0.0597 | |
| 78 | P | A | -0.4464 | |
| 79 | G | A | -0.3762 | |
| 80 | S | A | 0.8207 | |
| 81 | W | A | 1.9081 | |
| 82 | Y | A | 2.0686 | |
| 83 | Y | A | 1.7291 | |
| 84 | S | A | 0.4811 | |
| 85 | P | A | 0.1289 | |
| 86 | I | A | -0.1829 | |
| 87 | S | A | -0.6753 | |
| 88 | I | A | -0.7058 | |
| 89 | N | A | -1.7800 | |
| 90 | Y | A | -1.5201 | |
| 91 | R | A | -2.5847 | |
| 92 | T | A | -1.5089 |