| Chain sequence(s) |
A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCQADEFQCQSSGKCLPVNWVCDGDNDCGDDSDETNCATTGRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.3250 | |
| 2 | G | A | -0.8311 | |
| 3 | P | A | -0.9343 | |
| 4 | G | A | -1.3238 | |
| 5 | R | A | -1.6256 | |
| 6 | F | A | -0.9657 | |
| 7 | Q | A | -1.8230 | |
| 8 | C | A | 0.0000 | |
| 9 | E | A | -2.8177 | |
| 10 | S | A | -1.8100 | |
| 11 | G | A | -1.5376 | |
| 12 | Q | A | -1.4196 | |
| 13 | C | A | -0.9516 | |
| 14 | I | A | 0.0000 | |
| 15 | P | A | -0.5585 | |
| 16 | A | A | -0.5788 | |
| 17 | T | A | -0.2018 | |
| 18 | W | A | -0.5795 | |
| 19 | V | A | -1.1370 | |
| 20 | C | A | -1.8424 | |
| 21 | D | A | -2.7194 | |
| 22 | G | A | -2.7103 | |
| 23 | E | A | -3.4112 | |
| 24 | N | A | -3.1884 | |
| 25 | D | A | -1.9162 | |
| 26 | C | A | 0.0000 | |
| 27 | V | A | -0.1043 | |
| 28 | D | A | -2.2317 | |
| 29 | D | A | -2.7905 | |
| 30 | S | A | 0.0000 | |
| 31 | D | A | 0.0000 | |
| 32 | E | A | -2.7252 | |
| 33 | K | A | -2.6558 | |
| 34 | S | A | -1.2660 | |
| 35 | C | A | -0.7888 | |
| 36 | A | A | -0.4089 | |
| 37 | T | A | -0.2904 | |
| 38 | T | A | -0.0553 | |
| 39 | A | A | -0.0810 | |
| 40 | P | A | -0.6145 | |
| 41 | T | A | -0.6549 | |
| 42 | C | A | -1.1377 | |
| 43 | Q | A | -1.7458 | |
| 44 | A | A | -1.1716 | |
| 45 | D | A | -1.8596 | |
| 46 | E | A | -1.5546 | |
| 47 | F | A | -0.7831 | |
| 48 | Q | A | -1.3372 | |
| 49 | C | A | 0.0000 | |
| 50 | Q | A | -2.3133 | |
| 51 | S | A | -2.0037 | |
| 52 | S | A | -1.7689 | |
| 53 | G | A | -1.5479 | |
| 54 | K | A | -2.1528 | |
| 55 | C | A | -1.2615 | |
| 56 | L | A | 0.0000 | |
| 57 | P | A | -0.8348 | |
| 58 | V | A | -0.7217 | |
| 59 | N | A | -1.2473 | |
| 60 | W | A | -0.8898 | |
| 61 | V | A | 0.0000 | |
| 62 | C | A | -2.1545 | |
| 63 | D | A | -2.9419 | |
| 64 | G | A | -2.4895 | |
| 65 | D | A | -3.2793 | |
| 66 | N | A | -3.2389 | |
| 67 | D | A | -2.4494 | |
| 68 | C | A | 0.0000 | |
| 69 | G | A | -2.7561 | |
| 70 | D | A | -3.3770 | |
| 71 | D | A | -3.6971 | |
| 72 | S | A | 0.0000 | |
| 73 | D | A | 0.0000 | |
| 74 | E | A | -2.4329 | |
| 75 | T | A | -1.4744 | |
| 76 | N | A | -1.3100 | |
| 77 | C | A | -1.1126 | |
| 78 | A | A | -0.6390 | |
| 79 | T | A | -0.6558 | |
| 80 | T | A | -0.8713 | |
| 81 | G | A | -1.3532 | |
| 82 | R | A | -2.2824 | |
| 83 | T | A | -1.0654 |