Project name: query_structure

Status: done

Started: 2026-03-16 23:24:11
Settings
Chain sequence(s) A: GIPCGESCVFIPCTVTALLGCSCKDKVCYKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:20)
Show buried residues

Minimal score value
-2.9242
Maximal score value
3.0006
Average score
0.3046
Total score value
9.4422

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5188
2 I A 1.1525
3 P A 0.1556
4 C A 0.4779
5 G A -0.2996
6 E A 0.3554
7 S A 0.2304
8 C A 0.7542
9 V A 1.4194
10 F A 2.9546
11 I A 3.0006
12 P A 1.5388
13 C A 1.3888
14 T A 1.5801
15 V A 2.5575
16 T A 0.0000
17 A A 1.5473
18 L A 2.5796
19 L A 2.0731
20 G A 0.4814
21 C A 0.0000
22 S A -0.8588
23 C A -0.7509
24 K A -2.7584
25 D A -2.9242
26 K A -1.8782
27 V A -1.0866
28 C A 0.0000
29 Y A -0.9145
30 K A -1.0660
31 N A -1.7490
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Laboratory of Theory of Biopolymers 2018