| Chain sequence(s) |
A: GIPCGESCVFIPCTVTALLGCSCKDKVCYKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5188 | |
| 2 | I | A | 1.1525 | |
| 3 | P | A | 0.1556 | |
| 4 | C | A | 0.4779 | |
| 5 | G | A | -0.2996 | |
| 6 | E | A | 0.3554 | |
| 7 | S | A | 0.2304 | |
| 8 | C | A | 0.7542 | |
| 9 | V | A | 1.4194 | |
| 10 | F | A | 2.9546 | |
| 11 | I | A | 3.0006 | |
| 12 | P | A | 1.5388 | |
| 13 | C | A | 1.3888 | |
| 14 | T | A | 1.5801 | |
| 15 | V | A | 2.5575 | |
| 16 | T | A | 0.0000 | |
| 17 | A | A | 1.5473 | |
| 18 | L | A | 2.5796 | |
| 19 | L | A | 2.0731 | |
| 20 | G | A | 0.4814 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | -0.8588 | |
| 23 | C | A | -0.7509 | |
| 24 | K | A | -2.7584 | |
| 25 | D | A | -2.9242 | |
| 26 | K | A | -1.8782 | |
| 27 | V | A | -1.0866 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | -0.9145 | |
| 30 | K | A | -1.0660 | |
| 31 | N | A | -1.7490 |