| Chain sequence(s) |
A: FQKGHQF
C: FQKGHQF B: FQKGHQF E: FQKGHQF D: FQKGHQF G: FQKGHQF F: FQKGHQF I: FQKGHQF H: FQKGHQF K: FQKGHQF J: FQKGHQF M: FQKGHQF L: FQKGHQF O: FQKGHQF N: FQKGHQF Q: FQKGHQF P: FQKGHQF S: FQKGHQF R: FQKGHQF T: FQKGHQF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:00)
[INFO] Main: Simulation completed successfully. (00:03:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.0405 | |
| 2 | Q | A | 0.4623 | |
| 3 | K | A | -0.1746 | |
| 4 | G | A | -0.6463 | |
| 5 | H | A | 0.0923 | |
| 6 | Q | A | 0.7066 | |
| 7 | F | A | 3.1572 | |
| 1 | F | B | 1.7731 | |
| 2 | Q | B | 0.0000 | |
| 3 | K | B | -0.5378 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | -0.2230 | |
| 6 | Q | B | 0.5485 | |
| 7 | F | B | 2.8071 | |
| 1 | F | C | 1.6600 | |
| 2 | Q | C | -0.6736 | |
| 3 | K | C | -1.0407 | |
| 4 | G | C | -1.4997 | |
| 5 | H | C | -0.6830 | |
| 6 | Q | C | -0.2401 | |
| 7 | F | C | 2.0787 | |
| 1 | F | D | 1.9233 | |
| 2 | Q | D | -0.0662 | |
| 3 | K | D | -0.8744 | |
| 4 | G | D | -1.4559 | |
| 5 | H | D | -0.7464 | |
| 6 | Q | D | -0.2584 | |
| 7 | F | D | 2.0690 | |
| 1 | F | E | 1.8664 | |
| 2 | Q | E | 0.0000 | |
| 3 | K | E | -0.3791 | |
| 4 | G | E | -1.0666 | |
| 5 | H | E | -0.2815 | |
| 6 | Q | E | 0.5729 | |
| 7 | F | E | 2.8159 | |
| 1 | F | F | 2.0797 | |
| 2 | Q | F | 0.0000 | |
| 3 | K | F | -0.1556 | |
| 4 | G | F | -0.6254 | |
| 5 | H | F | 0.1191 | |
| 6 | Q | F | 0.7857 | |
| 7 | F | F | 3.2168 | |
| 1 | F | G | 2.2635 | |
| 2 | Q | G | 0.0000 | |
| 3 | K | G | 0.0194 | |
| 4 | G | G | -0.5471 | |
| 5 | H | G | 0.1110 | |
| 6 | Q | G | 0.8187 | |
| 7 | F | G | 3.1783 | |
| 1 | F | H | 2.3414 | |
| 2 | Q | H | 0.0000 | |
| 3 | K | H | 0.0750 | |
| 4 | G | H | -0.5096 | |
| 5 | H | H | 0.1043 | |
| 6 | Q | H | 0.7821 | |
| 7 | F | H | 3.1651 | |
| 1 | F | I | 2.4849 | |
| 2 | Q | I | 0.0000 | |
| 3 | K | I | 0.0851 | |
| 4 | G | I | -0.4995 | |
| 5 | H | I | 0.1034 | |
| 6 | Q | I | 0.7843 | |
| 7 | F | I | 3.1805 | |
| 1 | F | J | 2.5491 | |
| 2 | Q | J | 0.0000 | |
| 3 | K | J | 0.1121 | |
| 4 | G | J | -0.6016 | |
| 5 | H | J | 0.1031 | |
| 6 | Q | J | 0.8462 | |
| 7 | F | J | 3.2152 | |
| 1 | F | K | 2.7043 | |
| 2 | Q | K | 0.0000 | |
| 3 | K | K | -0.0796 | |
| 4 | G | K | -0.5075 | |
| 5 | H | K | 0.0771 | |
| 6 | Q | K | 0.8365 | |
| 7 | F | K | 3.2695 | |
| 1 | F | L | 2.2545 | |
| 2 | Q | L | 0.0000 | |
| 3 | K | L | -0.6170 | |
| 4 | G | L | -1.1134 | |
| 5 | H | L | -0.4557 | |
| 6 | Q | L | 0.6042 | |
| 7 | F | L | 2.8067 | |
| 1 | F | M | 1.8869 | |
| 2 | Q | M | -0.4251 | |
| 3 | K | M | -1.6923 | |
| 4 | G | M | -1.6742 | |
| 5 | H | M | -1.1627 | |
| 6 | Q | M | -0.3396 | |
| 7 | F | M | 1.9975 | |
| 1 | F | N | 2.1778 | |
| 2 | Q | N | -0.0098 | |
| 3 | K | N | -1.2727 | |
| 4 | G | N | -1.5504 | |
| 5 | H | N | -1.4299 | |
| 6 | Q | N | -0.6011 | |
| 7 | F | N | 1.8178 | |
| 1 | F | O | 2.4878 | |
| 2 | Q | O | 0.0000 | |
| 3 | K | O | -0.5733 | |
| 4 | G | O | -1.3800 | |
| 5 | H | O | -0.7925 | |
| 6 | Q | O | 0.0963 | |
| 7 | F | O | 2.2949 | |
| 1 | F | P | 1.7082 | |
| 2 | Q | P | 0.0000 | |
| 3 | K | P | -0.3568 | |
| 4 | G | P | -0.6899 | |
| 5 | H | P | -0.2199 | |
| 6 | Q | P | 0.3936 | |
| 7 | F | P | 2.7507 | |
| 1 | F | Q | 1.9048 | |
| 2 | Q | Q | 0.0000 | |
| 3 | K | Q | -0.1890 | |
| 4 | G | Q | -0.6323 | |
| 5 | H | Q | -0.0788 | |
| 6 | Q | Q | 0.4897 | |
| 7 | F | Q | 2.5706 | |
| 1 | F | R | 1.9849 | |
| 2 | Q | R | 0.0000 | |
| 3 | K | R | -0.0729 | |
| 4 | G | R | -0.6259 | |
| 5 | H | R | -0.0702 | |
| 6 | Q | R | 0.4872 | |
| 7 | F | R | 2.5634 | |
| 1 | F | S | 2.0300 | |
| 2 | Q | S | 0.0000 | |
| 3 | K | S | -0.0589 | |
| 4 | G | S | -0.6114 | |
| 5 | H | S | -0.0351 | |
| 6 | Q | S | 0.5457 | |
| 7 | F | S | 2.7857 | |
| 1 | F | T | 1.9864 | |
| 2 | Q | T | 0.0000 | |
| 3 | K | T | -0.1073 | |
| 4 | G | T | -0.6182 | |
| 5 | H | T | 0.0247 | |
| 6 | Q | T | 0.6369 | |
| 7 | F | T | 2.8567 |