Project name: eMA

Status: done

Started: 2025-02-26 03:50:26
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Chain sequence(s) A: MFDASNFKDFSSIASASSSWQNQHGSTMIIQVDSFGNVSGQYVNRAEGTGCQNSPYPLTGRVNGTFIDFSVKWNNSTENCNSNTQWTGYAQVNGNNTEIVTRWNLKYEGGSGPAIWQGQDTFQYVPTTE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-2.7755
Maximal score value
1.5901
Average score
-0.826
Total score value
-106.5478

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8327
2 F A -0.0767
3 D A -1.2091
4 A A -1.1770
5 S A -1.7090
6 N A -2.1449
7 F A 0.0000
8 K A -2.2073
9 D A -1.4709
10 F A 0.0000
11 S A -0.9271
12 S A -1.0979
13 I A 0.0000
14 A A -0.6195
15 S A -0.7951
16 A A -0.3955
17 S A -0.3585
18 S A 0.0000
19 S A -0.0060
20 W A 0.0000
21 Q A -0.9403
22 N A 0.0000
23 Q A -1.9683
24 H A -1.7865
25 G A -1.3650
26 S A 0.0000
27 T A -0.6904
28 M A 0.0000
29 I A 0.2269
30 I A 0.0000
31 Q A -1.6131
32 V A 0.0000
33 D A -1.0523
34 S A 0.1299
35 F A 1.0034
36 G A -0.7034
37 N A -1.3638
38 V A 0.0000
39 S A -1.2021
40 G A -0.7372
41 Q A -0.6989
42 Y A 0.0000
43 V A 0.0000
44 N A 0.0000
45 R A -2.5087
46 A A -2.2673
47 E A -2.6245
48 G A -1.7035
49 T A -1.4089
50 G A -1.6930
51 C A 0.0000
52 Q A -2.7589
53 N A -2.2132
54 S A -1.5598
55 P A -0.9628
56 Y A 0.0000
57 P A -0.9180
58 L A 0.0000
59 T A -1.1987
60 G A -1.4229
61 R A -1.7223
62 V A 0.0000
63 N A -1.2403
64 G A -1.1084
65 T A -0.2950
66 F A 0.5556
67 I A 0.0000
68 D A -1.4171
69 F A 0.0000
70 S A -1.1590
71 V A 0.0000
72 K A -1.9544
73 W A 0.0000
74 N A -2.1050
75 N A -1.5135
76 S A -1.0388
77 T A -1.2618
78 E A -2.4936
79 N A -2.3463
80 C A -1.8617
81 N A -2.2955
82 S A -1.4942
83 N A -1.3135
84 T A 0.0000
85 Q A -1.9776
86 W A 0.0000
87 T A -1.0642
88 G A -0.0757
89 Y A 0.6233
90 A A 0.0000
91 Q A 0.1157
92 V A -0.0320
93 N A -1.3329
94 G A -1.4118
95 N A -1.8352
96 N A -1.4536
97 T A 0.0000
98 E A -0.5325
99 I A 0.0000
100 V A -0.1486
101 T A 0.0000
102 R A -2.7755
103 W A -1.8386
104 N A -0.9935
105 L A -0.2294
106 K A -0.8327
107 Y A -0.6651
108 E A -1.9939
109 G A -1.0271
110 G A -1.0624
111 S A -0.9039
112 G A -0.8213
113 P A -0.8278
114 A A 0.1949
115 I A 1.5901
116 W A 1.2803
117 Q A -1.1520
118 G A -1.6491
119 Q A -2.3992
120 D A 0.0000
121 T A -1.0656
122 F A 0.0000
123 Q A -1.3996
124 Y A -0.3366
125 V A 0.3387
126 P A -0.2228
127 T A -0.3462
128 T A -0.9508
129 E A -1.9057
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Laboratory of Theory of Biopolymers 2018