Project name: query_structure

Status: done

Started: 2026-03-16 23:27:06
Settings
Chain sequence(s) A: GLPVCGETCFGGTCNTPGCICDPWPVCTRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-1.638
Maximal score value
1.7885
Average score
-0.0434
Total score value
-1.3015

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4701
2 L A 0.9707
3 P A 0.5411
4 V A 1.4113
5 C A 0.3985
6 G A -0.1168
7 E A -0.2704
8 T A 0.1663
9 C A 0.0000
10 F A 1.7885
11 G A 0.3678
12 G A 0.1430
13 T A -0.0885
14 C A -0.5663
15 N A -1.2439
16 T A -0.9074
17 P A -0.6579
18 G A -0.8411
19 C A -0.5818
20 I A 0.1751
21 C A 0.1371
22 D A -1.2150
23 P A -0.2925
24 W A 1.0481
25 P A 0.9011
26 V A 0.8188
27 C A 0.0000
28 T A 0.0000
29 R A -1.2792
30 N A -1.6380
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Laboratory of Theory of Biopolymers 2018