Project name: d3264a1b8df19aa

Status: done

Started: 2026-06-22 16:04:39
Settings
Chain sequence(s) B: MEELMKMKEEFKKKKSEFEKLAPVEQMKKLTEVAKEIKQKVEEIEARLAA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:47)
Show buried residues

Minimal score value
-4.7364
Maximal score value
1.1962
Average score
-2.2701
Total score value
-113.5046

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M B 0.1399
2 E B -1.8183
3 E B -1.7155
4 L B -0.9474
5 M B -1.2220
6 K B -3.1787
7 M B 0.0000
8 K B -3.1941
9 E B -4.3854
10 E B -4.5413
11 F B -3.5849
12 K B -4.7364
13 K B -4.6787
14 K B -4.5466
15 K B -4.1216
16 S B -3.4309
17 E B -4.0700
18 F B 0.0000
19 E B -3.5999
20 K B -3.1086
21 L B -1.1932
22 A B -0.2723
23 P B -0.1251
24 V B 1.1962
25 E B -0.6959
26 Q B -1.3946
27 M B 0.1344
28 K B -1.8069
29 K B -2.0840
30 L B -1.4370
31 T B -2.0974
32 E B -3.4968
33 V B 0.0000
34 A B -2.7127
35 K B -4.1052
36 E B -4.1763
37 I B -3.0513
38 K B -4.1082
39 Q B -4.1588
40 K B -3.2372
41 V B -2.8638
42 E B -3.9717
43 E B -3.2229
44 I B 0.0000
45 E B -2.8290
46 A B -2.0222
47 R B -2.1008
48 L B -0.2730
49 A B -0.3504
50 A B -0.3081
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018