| Chain sequence(s) |
B: DIKAEAEKRMEEVVAEAREMYRAAEQLDPREARSARHRAWNMVMNQTFIYTQLTGEEQRIPAI
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | B | -1.9772 | |
| 2 | I | B | -0.2592 | |
| 3 | K | B | -2.5756 | |
| 4 | A | B | -2.7535 | |
| 5 | E | B | -3.7877 | |
| 6 | A | B | 0.0000 | |
| 7 | E | B | -4.4090 | |
| 8 | K | B | -5.1960 | |
| 9 | R | B | -4.6601 | |
| 10 | M | B | 0.0000 | |
| 11 | E | B | -4.5282 | |
| 12 | E | B | -4.4600 | |
| 13 | V | B | -2.9649 | |
| 14 | V | B | -2.0031 | |
| 15 | A | B | -2.8169 | |
| 16 | E | B | -3.4638 | |
| 17 | A | B | 0.0000 | |
| 18 | R | B | -3.3804 | |
| 19 | E | B | -3.3470 | |
| 20 | M | B | -2.6610 | |
| 21 | Y | B | -3.1118 | |
| 22 | R | B | -3.5202 | |
| 23 | A | B | -2.2804 | |
| 24 | A | B | 0.0000 | |
| 25 | E | B | -3.2801 | |
| 26 | Q | B | -2.3649 | |
| 27 | L | B | -1.9525 | |
| 28 | D | B | -2.3588 | |
| 29 | P | B | -2.6811 | |
| 30 | R | B | -3.4353 | |
| 31 | E | B | -3.7971 | |
| 32 | A | B | -3.5189 | |
| 33 | R | B | -4.0214 | |
| 34 | S | B | -3.0076 | |
| 35 | A | B | -2.9210 | |
| 36 | R | B | -3.3259 | |
| 37 | H | B | -2.9416 | |
| 38 | R | B | -2.8226 | |
| 39 | A | B | 0.0000 | |
| 40 | W | B | -1.1110 | |
| 41 | N | B | -1.7490 | |
| 42 | M | B | -1.2820 | |
| 43 | V | B | 0.0000 | |
| 44 | M | B | -0.1856 | |
| 45 | N | B | -0.2764 | |
| 46 | Q | B | 0.0000 | |
| 47 | T | B | 0.0000 | |
| 48 | F | B | 1.3238 | |
| 49 | I | B | 1.0570 | |
| 50 | Y | B | -1.0351 | |
| 51 | T | B | -1.4030 | |
| 52 | Q | B | -0.9496 | |
| 53 | L | B | 0.0328 | |
| 54 | T | B | 0.0000 | |
| 55 | G | B | -2.1093 | |
| 56 | E | B | -3.5423 | |
| 57 | E | B | -3.3275 | |
| 58 | Q | B | -2.3516 | |
| 59 | R | B | -2.1349 | |
| 60 | I | B | -0.4745 | |
| 61 | P | B | -0.2048 | |
| 62 | A | B | 0.1781 | |
| 63 | I | B | -0.1887 |