Project name: 8e550b83b008968 [mutate: IA1A] [mutate: YF4A]

Status: done

Started: 2026-07-17 17:13:12
Settings
Chain sequence(s) A: APEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues YF4A
Energy difference between WT (input) and mutated protein (by FoldX) -0.0915898 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:53)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:57)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:49)
Show buried residues

Minimal score value
-3.5522
Maximal score value
1.5317
Average score
-0.6963
Total score value
-147.6146

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0862
2 P A -0.5480
3 E A -1.1367
4 F A 0.6309 mutated: YF4A
5 V A 0.0000
6 D A -1.5188
7 W A -1.7103
8 R A -2.4891
9 Q A -2.7750
10 K A -2.8455
11 G A -1.8038
12 A A 0.0000
13 V A -0.7761
14 T A 0.0000
15 P A -0.3445
16 V A -0.4376
17 K A -0.8509
18 N A -1.5649
19 Q A -1.1728
20 G A -1.2004
21 S A -0.6801
22 C A 0.0000
23 G A -0.7343
24 S A 0.0000
25 C A -0.4265
26 W A 0.0000
27 A A 0.0000
28 F A 0.0000
29 S A 0.0000
30 A A 0.0000
31 V A 0.0000
32 V A 0.0000
33 T A 0.0000
34 I A 0.0000
35 E A 0.0000
36 G A 0.0000
37 I A 0.0000
38 I A 0.0000
39 K A -1.3097
40 I A -1.2494
41 R A -2.3447
42 T A -1.6496
43 G A -1.5552
44 N A -1.6124
45 L A -0.3478
46 N A -0.4688
47 Q A -0.6761
48 Y A 0.0000
49 S A 0.0000
50 E A 0.0000
51 Q A 0.0000
52 E A 0.0000
53 L A 0.0000
54 L A 0.0000
55 D A 0.0000
56 C A 0.0000
57 D A 0.0000
58 R A -2.3580
59 R A -2.3990
60 S A 0.0000
61 Y A -0.1213
62 G A 0.0000
63 C A -0.6705
64 N A -1.0517
65 G A -0.6015
66 G A -0.4116
67 Y A 0.3541
68 P A 0.0000
69 W A 0.0840
70 S A 0.0000
71 A A 0.0000
72 L A 0.0000
73 Q A -1.0749
74 L A 0.0000
75 V A 0.0000
76 A A -1.5246
77 Q A -1.5044
78 Y A -0.4845
79 G A 0.0000
80 I A 0.0000
81 H A 0.0000
82 Y A -0.1566
83 R A -0.9053
84 N A -1.3880
85 T A -0.8663
86 Y A 0.0000
87 P A -1.1675
88 Y A -1.3311
89 E A -2.0096
90 G A -1.3195
91 V A -0.8560
92 Q A -1.5690
93 R A -1.6794
94 Y A -0.0481
95 C A -1.0857
96 R A -2.2969
97 S A 0.0000
98 R A -3.2292
99 E A -3.5522
100 K A -2.7656
101 G A -1.9617
102 P A -0.9194
103 Y A -0.2150
104 A A -0.0054
105 A A 0.0000
106 K A -1.6065
107 T A 0.0000
108 D A -2.5185
109 G A -1.7502
110 V A -1.2494
111 R A -2.2102
112 Q A -2.0883
113 V A -1.3202
114 Q A -1.7526
115 P A -0.7279
116 Y A -0.1812
117 N A -1.1164
118 Q A -0.7966
119 G A -0.3730
120 A A -0.1912
121 L A 0.0000
122 L A 0.0000
123 Y A 0.9346
124 S A 0.0000
125 I A 0.0000
126 A A -0.0616
127 N A -0.9209
128 Q A -0.4300
129 P A 0.0000
130 V A 0.0000
131 S A 0.0000
132 V A 0.0000
133 V A 0.0000
134 L A 0.0000
135 Q A -1.2664
136 A A 0.0000
137 A A -1.1770
138 G A -1.7508
139 K A -2.4187
140 D A -2.0921
141 F A 0.0000
142 Q A -1.7241
143 L A -0.8589
144 Y A 0.0000
145 R A -2.8755
146 G A -2.0769
147 G A -0.6570
148 I A 0.7468
149 F A 0.0000
150 V A 1.5317
151 G A 0.3159
152 P A -0.2059
153 C A -0.6386
154 G A -1.0960
155 N A -1.9970
156 K A -2.4374
157 V A -1.3757
158 D A -1.5657
159 H A 0.0000
160 A A 0.0000
161 V A 0.0000
162 A A 0.0000
163 A A 0.0000
164 V A 0.0000
165 G A 0.0000
166 Y A 0.0000
167 G A 0.0000
168 P A -0.9716
169 N A -1.4616
170 Y A -0.6614
171 I A 0.0000
172 L A 0.0000
173 I A 0.0000
174 K A 0.0000
175 N A 0.0000
176 S A 0.0000
177 W A -0.8470
178 G A -1.0712
179 T A -1.6310
180 G A -1.6263
181 W A 0.0000
182 G A -2.3951
183 E A -3.3651
184 N A -2.6302
185 G A 0.0000
186 Y A 0.0000
187 I A 0.0000
188 R A -0.7584
189 I A 0.0000
190 K A -0.6905
191 R A -1.1792
192 G A -1.4195
193 T A -0.9517
194 G A -1.0813
195 N A -1.1537
196 S A -0.5955
197 Y A -0.0029
198 G A 0.0000
199 V A -0.0654
200 C A 0.0000
201 G A 0.0000
202 L A 0.0000
203 Y A 0.0000
204 T A -0.2703
205 S A -0.1796
206 S A 0.0000
207 F A -0.7274
208 Y A 0.0000
209 P A 0.0000
210 V A -1.1735
211 K A -1.8476
212 N A -2.1025
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Laboratory of Theory of Biopolymers 2018