Project name: S44

Status: done

Started: 2025-06-25 14:06:26
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Chain sequence(s) H: DVQLQESGGGLVQPGGSLRLSCAASGFPFNIAAMSWVRQAPGKGLEWVSTINKDGDTYYVDSVKGRFTISRDNAKDTLYLELNGLKPEDTAMYYCALLRGTRGPSNANSPDVNYRGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-3.1485
Maximal score value
1.1524
Average score
-0.9508
Total score value
-118.8544

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.0590
2 V H -1.5509
3 Q H -1.8832
4 L H 0.0000
5 Q H -1.5268
6 E H 0.0000
7 S H -0.9279
8 G H -0.8398
9 G H -0.4432
11 G H 0.2901
12 L H 1.1524
13 V H -0.0242
14 Q H -1.3821
15 P H -1.8218
16 G H -1.4340
17 G H -0.9911
18 S H -1.1463
19 L H -0.4498
20 R H -1.2121
21 L H 0.0000
22 S H -0.5704
23 C H 0.0000
24 A H -1.0713
25 A H -1.2696
26 S H -1.3480
27 G H -1.4386
28 F H -0.8748
29 P H -0.7145
30 F H 0.0000
35 N H -1.4603
36 I H -0.4770
37 A H -1.2147
38 A H -1.2685
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7512
45 A H 0.0000
46 P H -0.8345
47 G H -1.0418
48 K H -1.2847
49 G H -0.8534
50 L H -0.0855
51 E H -0.3011
52 W H 0.0477
53 V H 0.0000
54 S H 0.0000
55 T H 0.0000
56 I H 0.0000
57 N H -1.9230
58 K H -2.7441
59 D H -3.1485
63 G H -2.6157
64 D H -2.5040
65 T H -0.7763
66 Y H 0.4791
67 Y H -0.2035
68 V H -0.8095
69 D H -2.2700
70 S H -1.8334
71 V H 0.0000
72 K H -2.4115
74 G H -1.8138
75 R H -1.7020
76 F H 0.0000
77 T H -0.6588
78 I H 0.0000
79 S H -0.8297
80 R H -1.7429
81 D H -2.6939
82 N H -2.9354
83 A H -2.0454
84 K H -2.9053
85 D H -2.7379
86 T H 0.0000
87 L H 0.0000
88 Y H -0.4864
89 L H 0.0000
90 E H -1.0295
91 L H 0.0000
92 N H -1.4823
93 G H -1.4209
94 L H 0.0000
95 K H -2.4540
96 P H -1.9576
97 E H -2.3643
98 D H 0.0000
99 T H -0.8367
100 A H 0.0000
101 M H -0.2822
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 L H 0.0000
107 L H -1.3198
108 R H -2.2024
109 G H -1.7869
110 T H -1.6608
111 R H -2.5538
111A G H -1.8401
111B P H -1.4923
111C S H -1.5143
112C N H -1.9550
112B A H -1.2301
112A N H -1.7319
112 S H -1.0201
113 P H -0.9299
114 D H -1.4825
115 V H -1.0963
116 N H -1.4518
117 Y H -1.1318
118 R H -1.3873
119 G H 0.0000
120 Q H -1.5692
121 G H -1.0893
122 T H 0.0000
123 Q H -0.5892
124 V H 0.0000
125 T H -0.1731
126 V H 0.0000
127 S H -0.7879
128 S H -0.6573
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Laboratory of Theory of Biopolymers 2018