Project name: RFC6

Status: done

Started: 2025-07-15 15:36:14
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Chain sequence(s) A: SITTTTTTEINIKVTGNEPKPSIPKTTLTVTGSAAASNSTVTDHSKIKNDGENIYLDSTLTADGTTTKKKKILDLKKGELAKELDQAELDAA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:01)
Show buried residues

Minimal score value
-3.4676
Maximal score value
0.6493
Average score
-1.2754
Total score value
-117.335

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.1561
2 I A 0.6493
3 T A 0.2555
4 T A -0.0340
5 T A -0.3153
6 T A -0.6235
7 T A -0.5928
8 T A 0.0000
9 E A -2.0424
10 I A -1.3268
11 N A -1.8511
12 I A -0.6014
13 K A -1.7029
14 V A -0.8094
15 T A -1.2392
16 G A -2.0836
17 N A -2.6693
18 E A -3.1219
19 P A -2.2617
20 K A -3.0909
21 P A -2.3165
22 S A -1.8350
23 I A 0.0000
24 P A -1.6353
25 K A -2.6230
26 T A 0.0000
27 T A -1.2785
28 L A 0.0000
29 T A -0.4652
30 V A 0.0000
31 T A -0.3147
32 G A -0.2743
33 S A -0.1456
34 A A 0.0000
35 A A -0.3097
36 A A -0.1907
37 S A -0.7314
38 N A -1.5390
39 S A -0.8993
40 T A -0.4537
41 V A 0.0157
42 T A -0.6892
43 D A -1.3810
44 H A -1.9710
45 S A -1.3755
46 K A -1.2232
47 I A 0.0252
48 K A -2.0189
49 N A -2.9187
50 D A -3.4676
51 G A -2.9349
52 E A -3.3815
53 N A -2.6985
54 I A 0.0000
55 Y A -1.2418
56 L A 0.0000
57 D A -1.0414
58 S A 0.0000
59 T A -1.4250
60 L A 0.0000
61 T A -0.7945
62 A A 0.0000
63 D A -1.2844
64 G A -0.9356
65 T A -0.5968
66 T A -0.6116
67 T A -0.9580
68 K A -1.9400
69 K A -2.1072
70 K A -1.9148
71 K A -1.2373
72 I A -1.3410
73 L A 0.0000
74 D A 0.0000
75 L A -2.3991
76 K A -3.4509
77 K A -3.3862
78 G A 0.0000
79 E A -2.6019
80 L A -1.2241
81 A A -1.2637
82 K A -2.1827
83 E A -2.8850
84 L A -2.6739
85 D A -2.9163
86 Q A -2.1307
87 A A -1.7574
88 E A -2.4849
89 L A -2.0210
90 D A -2.3292
91 A A -1.1651
92 A A -0.6972
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Laboratory of Theory of Biopolymers 2018