Project name: query_structure

Status: done

Started: 2026-03-17 01:22:48
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDLYVITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAGWGNWELGYSWSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:22)
Show buried residues

Minimal score value
-2.6983
Maximal score value
1.7853
Average score
-0.3945
Total score value
-37.4765

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7853
2 S A 0.7752
3 S A 0.7601
4 V A 0.3601
5 P A 0.0000
6 T A -1.6613
7 K A -2.6737
8 L A 0.0000
9 E A -1.9354
10 V A 0.0875
11 V A 1.5268
12 A A 0.8868
13 A A 0.3033
14 T A -0.1945
15 P A -0.8008
16 T A -0.5258
17 S A -0.3174
18 L A 0.0000
19 L A 0.7316
20 I A 0.0000
21 S A -0.9801
22 W A 0.0000
23 D A -2.6983
24 A A -1.2425
25 P A -0.0114
26 A A 0.4244
27 V A 0.5976
28 T A -0.1109
29 V A -0.2901
30 D A -1.2199
31 L A -0.5244
32 Y A 0.0000
33 V A 0.0000
34 I A 0.0000
35 T A -0.4046
36 Y A -0.2803
37 G A 0.0000
38 E A -1.2979
39 T A -1.2251
40 G A -1.2298
41 G A -1.3463
42 N A -1.5292
43 S A -0.8260
44 P A -0.2927
45 V A 0.4874
46 Q A -0.7642
47 E A -1.5267
48 F A -0.5936
49 T A -0.1787
50 V A 0.0000
51 P A -1.0630
52 G A -1.1911
53 S A -1.3335
54 K A -2.1938
55 S A -1.4468
56 T A -0.7858
57 A A 0.0000
58 T A 0.2834
59 I A 0.0000
60 S A -0.4729
61 G A -0.6848
62 L A 0.0000
63 S A -0.8369
64 P A -0.9927
65 G A -1.0822
66 V A -0.9433
67 D A -1.8774
68 Y A 0.0000
69 T A -0.7352
70 I A 0.0000
71 T A -0.0915
72 V A 0.0000
73 Y A 0.6388
74 A A 0.0000
75 G A 0.0000
76 W A 0.2193
77 G A -0.0862
78 N A -0.4807
79 W A 0.2742
80 E A -0.8344
81 L A 0.6753
82 G A 0.3588
83 Y A 0.7128
84 S A 0.6332
85 W A 1.1356
86 S A 0.0000
87 S A 0.1356
88 P A 0.1952
89 I A 0.1046
90 S A -0.3451
91 I A -0.5439
92 N A -1.7376
93 Y A -1.4626
94 R A -2.3473
95 T A -1.3191
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Laboratory of Theory of Biopolymers 2018