Project name: wild type

Status: done

Started: 2025-10-27 18:10:58
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Chain sequence(s) C: EVQLLESGGGLVQPGGSLRLSCAASGFTFSYYYMGWVRQAPGKGLEWVSGISPSSGYTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYYYGYYYSHMDYWGQGTLVTVSSDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRSGLHTFGQGTKLEIK
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:28)
Show buried residues

Minimal score value
-2.7115
Maximal score value
2.1758
Average score
-0.4441
Total score value
-101.2655

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 E C -1.9415
4 V C -0.8795
5 Q C -0.8178
6 L C 0.0000
7 L C 0.4560
8 E C 0.0000
9 S C -0.3921
10 G C -0.6007
11 G C 0.0838
12 G C 0.7757
13 L C 1.3065
14 V C 0.0000
15 Q C -1.3916
16 P C -1.6489
17 G C -1.4137
18 G C -1.1379
19 S C -1.1127
20 L C -1.0731
21 R C -2.0574
22 L C 0.0000
23 S C -0.5111
24 C C 0.0000
25 A C -0.2194
26 A C 0.0000
27 S C -0.8875
28 G C -0.9918
29 F C -0.1872
30 T C 0.2056
31 F C 0.0000
32 S C -0.0349
33 Y C 1.5427
34 Y C 0.0000
35 Y C 0.8885
36 M C 0.0000
37 G C 0.0000
38 W C 0.0000
39 V C 0.0000
40 R C 0.0000
41 Q C -0.6569
42 A C -1.0687
43 P C -0.8508
44 G C -1.4648
45 K C -2.3302
46 G C -1.5741
47 L C 0.0000
48 E C -1.0836
49 W C 0.0000
50 V C 0.0000
51 S C 0.0000
52 G C 0.0000
53 I C 0.0000
54 S C 0.0000
55 P C 0.2566
56 S C -0.1879
57 S C -0.2532
58 G C -0.0062
59 Y C 1.0223
60 T C 0.5274
61 Y C 0.1037
62 Y C -0.8317
63 A C -1.5442
64 D C -2.6210
65 S C -1.7465
66 V C 0.0000
67 K C -2.5091
68 G C -1.6327
69 R C 0.0000
70 F C 0.0000
71 T C -0.7558
72 I C 0.0000
73 S C -0.4560
74 R C -0.9447
75 D C -1.5020
76 N C -1.5001
77 S C -1.5807
78 K C -2.3475
79 N C -1.6746
80 T C -1.0093
81 L C 0.0000
82 Y C -0.5418
83 L C 0.0000
84 Q C -1.1706
85 M C 0.0000
86 N C -1.3246
87 S C -1.2128
88 L C 0.0000
89 R C -2.3274
90 A C -1.7651
91 E C -2.2305
92 D C 0.0000
93 T C -0.3953
94 A C 0.0000
95 V C 0.7048
96 Y C 0.0000
97 Y C 0.0000
98 C C 0.0000
99 A C 0.0000
100 R C 0.0000
101 Y C 0.0000
102 Y C 1.8658
103 Y C 2.1758
104 G C 1.3930
105 Y C 0.0000
106 Y C 1.7064
107 Y C 1.9325
108 S C 0.0000
109 H C 0.0000
110 M C 0.0000
111 D C 0.0000
112 Y C 0.6035
113 W C 0.0195
114 G C 0.0000
115 Q C -1.3057
116 G C -0.3108
117 T C 0.4592
118 L C 1.6119
119 V C 0.0000
120 T C 0.2766
121 V C 0.0000
122 S C -0.4707
123 S C -0.6643
139 D C -2.4137
140 I C 0.0000
141 Q C -2.2580
142 M C 0.0000
143 T C -1.2961
144 Q C 0.0000
145 S C -0.7453
146 P C -0.6396
147 S C -0.8989
148 S C -1.0745
149 L C -0.5768
150 S C -0.7157
151 A C 0.0000
152 S C -0.1084
153 V C 0.7519
154 G C -0.5769
155 D C -1.4217
156 R C -2.1787
157 V C 0.0000
158 T C -0.5775
159 I C 0.0000
160 T C -0.8365
161 C C 0.0000
162 R C -2.7115
163 A C 0.0000
164 S C -1.9003
165 Q C -1.8679
166 S C -1.1922
167 I C 0.0000
168 S C -0.4582
169 S C -0.1692
170 Y C 0.5525
171 L C 0.0000
172 N C 0.0000
173 W C 0.0000
174 Y C 0.0000
175 Q C 0.0000
176 Q C -1.3512
177 K C -1.8715
178 P C -1.2324
179 G C -1.5570
180 K C -2.5425
181 A C -1.5520
182 P C 0.0000
183 K C -1.1787
184 L C 0.0000
185 L C 0.0000
186 I C 0.0000
187 Y C 0.5654
188 A C 0.3665
189 A C 0.0000
190 S C -0.1675
191 S C 0.1210
192 L C 0.3096
193 Q C -0.1782
194 S C -0.4018
195 G C -0.5626
196 V C 0.0000
197 P C -0.3772
198 S C -0.4225
199 R C -0.7056
200 F C 0.0000
201 S C -0.2748
202 G C -0.2098
203 S C -0.5936
204 G C -0.9560
205 S C -0.7334
206 G C -1.0472
207 T C -1.6393
208 D C -2.0736
209 F C 0.0000
210 T C -0.7182
211 L C 0.0000
212 T C -0.5848
213 I C 0.0000
214 S C -1.2235
215 S C -1.0305
216 L C 0.0000
217 Q C -0.7712
218 P C -0.6210
219 E C -1.8753
220 D C 0.0000
221 F C -0.6514
222 A C 0.0000
223 T C -1.1376
224 Y C 0.0000
225 Y C 0.0000
226 C C 0.0000
227 Q C 0.0000
228 Q C 0.0000
229 S C 0.0000
230 R C 0.0856
231 S C -0.1088
232 G C 0.1408
233 L C -0.2619
234 H C 0.0000
235 T C -0.7476
236 F C 0.0000
237 G C 0.0000
238 Q C -1.6442
239 G C 0.0000
240 T C 0.0000
241 K C -1.8440
242 L C 0.0000
243 E C -1.2209
244 I C 0.6174
245 K C -0.8564
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Laboratory of Theory of Biopolymers 2018