| Chain sequence(s) |
C: EVQLLESGGGLVQPGGSLRLSCAASGFTFSYYYMGWVRQAPGKGLEWVSGISPSSGYTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYYYGYYYSHMDYWGQGTLVTVSSDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRSGLHTFGQGTKLEIK
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:27)
[INFO] Main: Simulation completed successfully. (00:02:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | E | C | -1.9415 | |
| 4 | V | C | -0.8795 | |
| 5 | Q | C | -0.8178 | |
| 6 | L | C | 0.0000 | |
| 7 | L | C | 0.4560 | |
| 8 | E | C | 0.0000 | |
| 9 | S | C | -0.3921 | |
| 10 | G | C | -0.6007 | |
| 11 | G | C | 0.0838 | |
| 12 | G | C | 0.7757 | |
| 13 | L | C | 1.3065 | |
| 14 | V | C | 0.0000 | |
| 15 | Q | C | -1.3916 | |
| 16 | P | C | -1.6489 | |
| 17 | G | C | -1.4137 | |
| 18 | G | C | -1.1379 | |
| 19 | S | C | -1.1127 | |
| 20 | L | C | -1.0731 | |
| 21 | R | C | -2.0574 | |
| 22 | L | C | 0.0000 | |
| 23 | S | C | -0.5111 | |
| 24 | C | C | 0.0000 | |
| 25 | A | C | -0.2194 | |
| 26 | A | C | 0.0000 | |
| 27 | S | C | -0.8875 | |
| 28 | G | C | -0.9918 | |
| 29 | F | C | -0.1872 | |
| 30 | T | C | 0.2056 | |
| 31 | F | C | 0.0000 | |
| 32 | S | C | -0.0349 | |
| 33 | Y | C | 1.5427 | |
| 34 | Y | C | 0.0000 | |
| 35 | Y | C | 0.8885 | |
| 36 | M | C | 0.0000 | |
| 37 | G | C | 0.0000 | |
| 38 | W | C | 0.0000 | |
| 39 | V | C | 0.0000 | |
| 40 | R | C | 0.0000 | |
| 41 | Q | C | -0.6569 | |
| 42 | A | C | -1.0687 | |
| 43 | P | C | -0.8508 | |
| 44 | G | C | -1.4648 | |
| 45 | K | C | -2.3302 | |
| 46 | G | C | -1.5741 | |
| 47 | L | C | 0.0000 | |
| 48 | E | C | -1.0836 | |
| 49 | W | C | 0.0000 | |
| 50 | V | C | 0.0000 | |
| 51 | S | C | 0.0000 | |
| 52 | G | C | 0.0000 | |
| 53 | I | C | 0.0000 | |
| 54 | S | C | 0.0000 | |
| 55 | P | C | 0.2566 | |
| 56 | S | C | -0.1879 | |
| 57 | S | C | -0.2532 | |
| 58 | G | C | -0.0062 | |
| 59 | Y | C | 1.0223 | |
| 60 | T | C | 0.5274 | |
| 61 | Y | C | 0.1037 | |
| 62 | Y | C | -0.8317 | |
| 63 | A | C | -1.5442 | |
| 64 | D | C | -2.6210 | |
| 65 | S | C | -1.7465 | |
| 66 | V | C | 0.0000 | |
| 67 | K | C | -2.5091 | |
| 68 | G | C | -1.6327 | |
| 69 | R | C | 0.0000 | |
| 70 | F | C | 0.0000 | |
| 71 | T | C | -0.7558 | |
| 72 | I | C | 0.0000 | |
| 73 | S | C | -0.4560 | |
| 74 | R | C | -0.9447 | |
| 75 | D | C | -1.5020 | |
| 76 | N | C | -1.5001 | |
| 77 | S | C | -1.5807 | |
| 78 | K | C | -2.3475 | |
| 79 | N | C | -1.6746 | |
| 80 | T | C | -1.0093 | |
| 81 | L | C | 0.0000 | |
| 82 | Y | C | -0.5418 | |
| 83 | L | C | 0.0000 | |
| 84 | Q | C | -1.1706 | |
| 85 | M | C | 0.0000 | |
| 86 | N | C | -1.3246 | |
| 87 | S | C | -1.2128 | |
| 88 | L | C | 0.0000 | |
| 89 | R | C | -2.3274 | |
| 90 | A | C | -1.7651 | |
| 91 | E | C | -2.2305 | |
| 92 | D | C | 0.0000 | |
| 93 | T | C | -0.3953 | |
| 94 | A | C | 0.0000 | |
| 95 | V | C | 0.7048 | |
| 96 | Y | C | 0.0000 | |
| 97 | Y | C | 0.0000 | |
| 98 | C | C | 0.0000 | |
| 99 | A | C | 0.0000 | |
| 100 | R | C | 0.0000 | |
| 101 | Y | C | 0.0000 | |
| 102 | Y | C | 1.8658 | |
| 103 | Y | C | 2.1758 | |
| 104 | G | C | 1.3930 | |
| 105 | Y | C | 0.0000 | |
| 106 | Y | C | 1.7064 | |
| 107 | Y | C | 1.9325 | |
| 108 | S | C | 0.0000 | |
| 109 | H | C | 0.0000 | |
| 110 | M | C | 0.0000 | |
| 111 | D | C | 0.0000 | |
| 112 | Y | C | 0.6035 | |
| 113 | W | C | 0.0195 | |
| 114 | G | C | 0.0000 | |
| 115 | Q | C | -1.3057 | |
| 116 | G | C | -0.3108 | |
| 117 | T | C | 0.4592 | |
| 118 | L | C | 1.6119 | |
| 119 | V | C | 0.0000 | |
| 120 | T | C | 0.2766 | |
| 121 | V | C | 0.0000 | |
| 122 | S | C | -0.4707 | |
| 123 | S | C | -0.6643 | |
| 139 | D | C | -2.4137 | |
| 140 | I | C | 0.0000 | |
| 141 | Q | C | -2.2580 | |
| 142 | M | C | 0.0000 | |
| 143 | T | C | -1.2961 | |
| 144 | Q | C | 0.0000 | |
| 145 | S | C | -0.7453 | |
| 146 | P | C | -0.6396 | |
| 147 | S | C | -0.8989 | |
| 148 | S | C | -1.0745 | |
| 149 | L | C | -0.5768 | |
| 150 | S | C | -0.7157 | |
| 151 | A | C | 0.0000 | |
| 152 | S | C | -0.1084 | |
| 153 | V | C | 0.7519 | |
| 154 | G | C | -0.5769 | |
| 155 | D | C | -1.4217 | |
| 156 | R | C | -2.1787 | |
| 157 | V | C | 0.0000 | |
| 158 | T | C | -0.5775 | |
| 159 | I | C | 0.0000 | |
| 160 | T | C | -0.8365 | |
| 161 | C | C | 0.0000 | |
| 162 | R | C | -2.7115 | |
| 163 | A | C | 0.0000 | |
| 164 | S | C | -1.9003 | |
| 165 | Q | C | -1.8679 | |
| 166 | S | C | -1.1922 | |
| 167 | I | C | 0.0000 | |
| 168 | S | C | -0.4582 | |
| 169 | S | C | -0.1692 | |
| 170 | Y | C | 0.5525 | |
| 171 | L | C | 0.0000 | |
| 172 | N | C | 0.0000 | |
| 173 | W | C | 0.0000 | |
| 174 | Y | C | 0.0000 | |
| 175 | Q | C | 0.0000 | |
| 176 | Q | C | -1.3512 | |
| 177 | K | C | -1.8715 | |
| 178 | P | C | -1.2324 | |
| 179 | G | C | -1.5570 | |
| 180 | K | C | -2.5425 | |
| 181 | A | C | -1.5520 | |
| 182 | P | C | 0.0000 | |
| 183 | K | C | -1.1787 | |
| 184 | L | C | 0.0000 | |
| 185 | L | C | 0.0000 | |
| 186 | I | C | 0.0000 | |
| 187 | Y | C | 0.5654 | |
| 188 | A | C | 0.3665 | |
| 189 | A | C | 0.0000 | |
| 190 | S | C | -0.1675 | |
| 191 | S | C | 0.1210 | |
| 192 | L | C | 0.3096 | |
| 193 | Q | C | -0.1782 | |
| 194 | S | C | -0.4018 | |
| 195 | G | C | -0.5626 | |
| 196 | V | C | 0.0000 | |
| 197 | P | C | -0.3772 | |
| 198 | S | C | -0.4225 | |
| 199 | R | C | -0.7056 | |
| 200 | F | C | 0.0000 | |
| 201 | S | C | -0.2748 | |
| 202 | G | C | -0.2098 | |
| 203 | S | C | -0.5936 | |
| 204 | G | C | -0.9560 | |
| 205 | S | C | -0.7334 | |
| 206 | G | C | -1.0472 | |
| 207 | T | C | -1.6393 | |
| 208 | D | C | -2.0736 | |
| 209 | F | C | 0.0000 | |
| 210 | T | C | -0.7182 | |
| 211 | L | C | 0.0000 | |
| 212 | T | C | -0.5848 | |
| 213 | I | C | 0.0000 | |
| 214 | S | C | -1.2235 | |
| 215 | S | C | -1.0305 | |
| 216 | L | C | 0.0000 | |
| 217 | Q | C | -0.7712 | |
| 218 | P | C | -0.6210 | |
| 219 | E | C | -1.8753 | |
| 220 | D | C | 0.0000 | |
| 221 | F | C | -0.6514 | |
| 222 | A | C | 0.0000 | |
| 223 | T | C | -1.1376 | |
| 224 | Y | C | 0.0000 | |
| 225 | Y | C | 0.0000 | |
| 226 | C | C | 0.0000 | |
| 227 | Q | C | 0.0000 | |
| 228 | Q | C | 0.0000 | |
| 229 | S | C | 0.0000 | |
| 230 | R | C | 0.0856 | |
| 231 | S | C | -0.1088 | |
| 232 | G | C | 0.1408 | |
| 233 | L | C | -0.2619 | |
| 234 | H | C | 0.0000 | |
| 235 | T | C | -0.7476 | |
| 236 | F | C | 0.0000 | |
| 237 | G | C | 0.0000 | |
| 238 | Q | C | -1.6442 | |
| 239 | G | C | 0.0000 | |
| 240 | T | C | 0.0000 | |
| 241 | K | C | -1.8440 | |
| 242 | L | C | 0.0000 | |
| 243 | E | C | -1.2209 | |
| 244 | I | C | 0.6174 | |
| 245 | K | C | -0.8564 |