| Chain sequence(s) |
A: MYRDPEAASPGAPSRDVLLVSAIITVSLSVTVVLCGLCHWCQRKLGKRYKNSLETVGTPDSGRGRSEKKAINFPGARLQSAACRLPPFCVASRPSSACVCAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0085 | |
| 2 | Y | A | 0.6410 | |
| 3 | R | A | -1.7711 | |
| 4 | D | A | -2.1614 | |
| 5 | P | A | -2.2020 | |
| 6 | E | A | -2.8136 | |
| 7 | A | A | -1.4539 | |
| 8 | A | A | -0.7783 | |
| 9 | S | A | -0.6955 | |
| 10 | P | A | -0.5646 | |
| 11 | G | A | -0.6918 | |
| 12 | A | A | -0.6785 | |
| 13 | P | A | -0.5528 | |
| 14 | S | A | -0.8823 | |
| 15 | R | A | -1.6470 | |
| 16 | D | A | -0.6479 | |
| 17 | V | A | 1.8732 | |
| 18 | L | A | 2.1760 | |
| 19 | L | A | 2.8322 | |
| 20 | V | A | 3.7491 | |
| 21 | S | A | 2.8733 | |
| 22 | A | A | 3.4346 | |
| 23 | I | A | 4.7962 | |
| 24 | I | A | 4.2457 | |
| 25 | T | A | 3.1915 | |
| 26 | V | A | 3.9925 | |
| 27 | S | A | 3.3516 | |
| 28 | L | A | 3.9577 | |
| 29 | S | A | 3.5769 | |
| 30 | V | A | 3.8108 | |
| 31 | T | A | 3.7229 | |
| 32 | V | A | 4.3264 | |
| 33 | V | A | 4.3112 | |
| 34 | L | A | 4.0872 | |
| 35 | C | A | 2.9268 | |
| 36 | G | A | 2.2642 | |
| 37 | L | A | 2.5010 | |
| 38 | C | A | 1.3476 | |
| 39 | H | A | -0.4374 | |
| 40 | W | A | 0.1387 | |
| 41 | C | A | -0.8949 | |
| 42 | Q | A | -2.2984 | |
| 43 | R | A | -3.0624 | |
| 44 | K | A | -2.6374 | |
| 45 | L | A | -2.3418 | |
| 46 | G | A | -2.9004 | |
| 47 | K | A | -3.9583 | |
| 48 | R | A | -3.4418 | |
| 49 | Y | A | -1.6124 | |
| 50 | K | A | -2.7817 | |
| 51 | N | A | -2.7738 | |
| 52 | S | A | -1.3257 | |
| 53 | L | A | 0.2090 | |
| 54 | E | A | -1.3115 | |
| 55 | T | A | 0.2639 | |
| 56 | V | A | 1.3158 | |
| 57 | G | A | 0.2053 | |
| 58 | T | A | -0.6364 | |
| 59 | P | A | -1.4234 | |
| 60 | D | A | -2.3643 | |
| 61 | S | A | -1.9199 | |
| 62 | G | A | -2.3713 | |
| 63 | R | A | -3.0079 | |
| 64 | G | A | -2.8057 | |
| 65 | R | A | -3.1028 | |
| 66 | S | A | -2.5708 | |
| 67 | E | A | -3.6276 | |
| 68 | K | A | -3.5193 | |
| 69 | K | A | -2.5987 | |
| 70 | A | A | -0.2392 | |
| 71 | I | A | 1.5102 | |
| 72 | N | A | 0.3539 | |
| 73 | F | A | 1.3689 | |
| 74 | P | A | 0.2284 | |
| 75 | G | A | -0.4332 | |
| 76 | A | A | -0.7659 | |
| 77 | R | A | -1.4364 | |
| 78 | L | A | -0.0419 | |
| 79 | Q | A | -1.2192 | |
| 80 | S | A | -1.0288 | |
| 81 | A | A | -0.3834 | |
| 82 | A | A | 0.0191 | |
| 83 | C | A | 0.2586 | |
| 84 | R | A | -0.9157 | |
| 85 | L | A | 1.1653 | |
| 86 | P | A | 1.0037 | |
| 87 | P | A | 1.3752 | |
| 88 | F | A | 3.0064 | |
| 89 | C | A | 2.4900 | |
| 90 | V | A | 2.2105 | |
| 91 | A | A | 1.2852 | |
| 92 | S | A | -0.1952 | |
| 93 | R | A | -1.5513 | |
| 94 | P | A | -1.0304 | |
| 95 | S | A | -0.7982 | |
| 96 | S | A | -0.0700 | |
| 97 | A | A | 1.0016 | |
| 98 | C | A | 1.4943 | |
| 99 | V | A | 2.5798 | |
| 100 | C | A | 2.1712 | |
| 101 | A | A | 1.6819 | |
| 102 | L | A | 2.1049 |