Project name: SY7 (cryptic)

Status: done

Started: 2026-07-03 10:45:58
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Chain sequence(s) A: MYRDPEAASPGAPSRDVLLVSAIITVSLSVTVVLCGLCHWCQRKLGKRYKNSLETVGTPDSGRGRSEKKAINFPGARLQSAACRLPPFCVASRPSSACVCAL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-3.9583
Maximal score value
4.7962
Average score
0.1477
Total score value
15.0644

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0085
2 Y A 0.6410
3 R A -1.7711
4 D A -2.1614
5 P A -2.2020
6 E A -2.8136
7 A A -1.4539
8 A A -0.7783
9 S A -0.6955
10 P A -0.5646
11 G A -0.6918
12 A A -0.6785
13 P A -0.5528
14 S A -0.8823
15 R A -1.6470
16 D A -0.6479
17 V A 1.8732
18 L A 2.1760
19 L A 2.8322
20 V A 3.7491
21 S A 2.8733
22 A A 3.4346
23 I A 4.7962
24 I A 4.2457
25 T A 3.1915
26 V A 3.9925
27 S A 3.3516
28 L A 3.9577
29 S A 3.5769
30 V A 3.8108
31 T A 3.7229
32 V A 4.3264
33 V A 4.3112
34 L A 4.0872
35 C A 2.9268
36 G A 2.2642
37 L A 2.5010
38 C A 1.3476
39 H A -0.4374
40 W A 0.1387
41 C A -0.8949
42 Q A -2.2984
43 R A -3.0624
44 K A -2.6374
45 L A -2.3418
46 G A -2.9004
47 K A -3.9583
48 R A -3.4418
49 Y A -1.6124
50 K A -2.7817
51 N A -2.7738
52 S A -1.3257
53 L A 0.2090
54 E A -1.3115
55 T A 0.2639
56 V A 1.3158
57 G A 0.2053
58 T A -0.6364
59 P A -1.4234
60 D A -2.3643
61 S A -1.9199
62 G A -2.3713
63 R A -3.0079
64 G A -2.8057
65 R A -3.1028
66 S A -2.5708
67 E A -3.6276
68 K A -3.5193
69 K A -2.5987
70 A A -0.2392
71 I A 1.5102
72 N A 0.3539
73 F A 1.3689
74 P A 0.2284
75 G A -0.4332
76 A A -0.7659
77 R A -1.4364
78 L A -0.0419
79 Q A -1.2192
80 S A -1.0288
81 A A -0.3834
82 A A 0.0191
83 C A 0.2586
84 R A -0.9157
85 L A 1.1653
86 P A 1.0037
87 P A 1.3752
88 F A 3.0064
89 C A 2.4900
90 V A 2.2105
91 A A 1.2852
92 S A -0.1952
93 R A -1.5513
94 P A -1.0304
95 S A -0.7982
96 S A -0.0700
97 A A 1.0016
98 C A 1.4943
99 V A 2.5798
100 C A 2.1712
101 A A 1.6819
102 L A 2.1049
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Laboratory of Theory of Biopolymers 2018