| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGSFTFSSYNMGWFRQAPGKGRELVAAIGSDGSTSSKDSRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAGYGGSSNEGAWDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0874 | |
| 2 | V | A | -1.1674 | |
| 3 | Q | A | -0.9950 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.6486 | |
| 6 | E | A | -0.1880 | |
| 7 | S | A | -0.7711 | |
| 8 | G | A | -1.1966 | |
| 9 | G | A | -0.8240 | |
| 10 | G | A | -0.0467 | |
| 11 | L | A | 1.0238 | |
| 12 | V | A | -0.0315 | |
| 13 | Q | A | -1.3425 | |
| 14 | P | A | -1.6849 | |
| 15 | G | A | -1.5674 | |
| 16 | G | A | -1.1022 | |
| 17 | S | A | -1.5705 | |
| 18 | L | A | -1.1516 | |
| 19 | R | A | -2.3748 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5031 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1800 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9801 | |
| 26 | G | A | -1.3028 | |
| 27 | S | A | -0.9384 | |
| 28 | F | A | 0.0000 | |
| 29 | T | A | -0.4151 | |
| 30 | F | A | 0.0000 | |
| 31 | S | A | -1.0062 | |
| 32 | S | A | -0.5019 | |
| 33 | Y | A | 0.0000 | |
| 34 | N | A | -0.4463 | |
| 35 | M | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -1.5360 | |
| 41 | A | A | -1.6461 | |
| 42 | P | A | -1.3728 | |
| 43 | G | A | -1.6489 | |
| 44 | K | A | -2.5977 | |
| 45 | G | A | -2.0629 | |
| 46 | R | A | -2.1954 | |
| 47 | E | A | -2.0121 | |
| 48 | L | A | -1.1312 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | I | A | 0.0000 | |
| 53 | G | A | -1.0492 | |
| 54 | S | A | -1.2878 | |
| 55 | D | A | -2.1619 | |
| 56 | G | A | -1.6090 | |
| 57 | S | A | -1.0556 | |
| 58 | T | A | -0.7391 | |
| 59 | S | A | -0.7741 | |
| 60 | S | A | -1.1098 | |
| 61 | K | A | -1.7929 | |
| 62 | D | A | -1.2822 | |
| 63 | S | A | -1.0233 | |
| 64 | R | A | -1.2696 | |
| 65 | F | A | 0.0000 | |
| 66 | T | A | -1.0752 | |
| 67 | I | A | 0.0000 | |
| 68 | S | A | -0.5319 | |
| 69 | R | A | -1.0398 | |
| 70 | D | A | -1.5473 | |
| 71 | N | A | -1.8434 | |
| 72 | A | A | -1.4462 | |
| 73 | K | A | -2.2778 | |
| 74 | R | A | -1.7204 | |
| 75 | M | A | -0.9070 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | -0.6355 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -1.7826 | |
| 80 | M | A | 0.0000 | |
| 81 | N | A | -2.1867 | |
| 82 | S | A | -1.5475 | |
| 83 | L | A | 0.0000 | |
| 84 | R | A | -2.5165 | |
| 85 | A | A | -1.8063 | |
| 86 | E | A | -2.2961 | |
| 87 | D | A | 0.0000 | |
| 88 | T | A | -0.8957 | |
| 89 | A | A | 0.0000 | |
| 90 | V | A | -0.4689 | |
| 91 | Y | A | 0.0000 | |
| 92 | Y | A | -0.2727 | |
| 93 | C | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | Y | A | 0.6124 | |
| 98 | G | A | -0.3479 | |
| 99 | G | A | -0.5574 | |
| 100 | S | A | -0.9774 | |
| 101 | S | A | -1.5707 | |
| 102 | N | A | -2.4561 | |
| 103 | E | A | -2.7148 | |
| 104 | G | A | -1.8863 | |
| 105 | A | A | -1.3682 | |
| 106 | W | A | 0.0000 | |
| 107 | D | A | -1.6536 | |
| 108 | Y | A | -0.4990 | |
| 109 | W | A | -0.3349 | |
| 110 | G | A | -0.1870 | |
| 111 | Q | A | -0.9775 | |
| 112 | G | A | -0.6682 | |
| 113 | T | A | -0.8115 | |
| 114 | Q | A | -1.0284 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.3282 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -0.8087 | |
| 119 | S | A | -0.6858 |