| Chain sequence(s) |
B: MTAAELRALMDAFMEGVKKAMEILVEMVPEEHREEAKEKAKALKAKVEAK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:01)
[INFO] Main: Simulation completed successfully. (00:02:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.7038 | |
| 2 | T | B | -0.1024 | |
| 3 | A | B | -0.2848 | |
| 4 | A | B | -0.6488 | |
| 5 | E | B | -1.1669 | |
| 6 | L | B | -0.3446 | |
| 7 | R | B | -1.6085 | |
| 8 | A | B | -0.8953 | |
| 9 | L | B | 0.2569 | |
| 10 | M | B | -0.4401 | |
| 11 | D | B | -1.8875 | |
| 12 | A | B | -0.4638 | |
| 13 | F | B | 0.4111 | |
| 14 | M | B | -1.1285 | |
| 15 | E | B | -2.2470 | |
| 16 | G | B | -1.6250 | |
| 17 | V | B | -1.0823 | |
| 18 | K | B | -2.2959 | |
| 19 | K | B | -2.3914 | |
| 20 | A | B | -1.0967 | |
| 21 | M | B | 0.0000 | |
| 22 | E | B | -2.1164 | |
| 23 | I | B | 0.7102 | |
| 24 | L | B | 0.5446 | |
| 25 | V | B | 0.0000 | |
| 26 | E | B | -1.2963 | |
| 27 | M | B | 0.4359 | |
| 28 | V | B | -1.3762 | |
| 29 | P | B | -2.2857 | |
| 30 | E | B | -3.8796 | |
| 31 | E | B | -3.9066 | |
| 32 | H | B | -3.8545 | |
| 33 | R | B | -4.6653 | |
| 34 | E | B | -5.2346 | |
| 35 | E | B | -5.4116 | |
| 36 | A | B | -4.6556 | |
| 37 | K | B | -5.3888 | |
| 38 | E | B | -5.2220 | |
| 39 | K | B | -4.3200 | |
| 40 | A | B | 0.0000 | |
| 41 | K | B | -3.9924 | |
| 42 | A | B | -2.5319 | |
| 43 | L | B | -1.7350 | |
| 44 | K | B | -2.1990 | |
| 45 | A | B | -2.1887 | |
| 46 | K | B | -2.6918 | |
| 47 | V | B | -2.0507 | |
| 48 | E | B | -2.8758 | |
| 49 | A | B | -2.1570 | |
| 50 | K | B | -2.6142 |