| Chain sequence(s) |
A: STKDNFNVYKATRPYLAHCPDCGEGHSCHSPVALERIRNEATDGTLKIQVSLQIGIKTDDSHDWTKLRYMDNHMPADAERAGLFVRTSAPCTITGTMGHFILARCPKGETLTAGFTDSRKISHSCTHPFHHDPPVIGREKFHSRPQHGKELPCSTYVQSTAATTEEIEVHMPPDTPDRTLMSQQSGNVKITVNGQTVRYKCNCGGSNEGLTTTDKVINNCKVDQCHAAVTNHKKWQYNSPLVPRNAELGDRKGKIHIPFPLANATCRVPKARNPTVTYGKNQVIMLLYPDHPTLLSYRNMGEEPNYQEEWVMHKKEVVLTVPTEGLEVTWGNNEPYKYWPQLSTNGTAHGHPHEIILYYYELYPTMTVVVVSVATFILLSMVGMAAGMCICARRRCITPYELTPGATVPFLLSLVCCVRTAKA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:32)
[INFO] Main: Simulation completed successfully. (00:06:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.2740 | |
| 2 | T | A | -1.6712 | |
| 3 | K | A | -2.8672 | |
| 4 | D | A | -3.0009 | |
| 5 | N | A | -1.9831 | |
| 6 | F | A | -1.6675 | |
| 7 | N | A | -2.3531 | |
| 8 | V | A | -1.2315 | |
| 9 | Y | A | 0.0000 | |
| 10 | K | A | -1.5690 | |
| 11 | A | A | -0.9783 | |
| 12 | T | A | 0.0000 | |
| 13 | R | A | -0.6567 | |
| 14 | P | A | 0.0000 | |
| 15 | Y | A | 0.0464 | |
| 16 | L | A | 0.0000 | |
| 17 | A | A | 0.0000 | |
| 18 | H | A | -0.7608 | |
| 19 | C | A | 0.0000 | |
| 20 | P | A | -1.8111 | |
| 21 | D | A | -2.7200 | |
| 22 | C | A | -1.7000 | |
| 23 | G | A | -2.0789 | |
| 24 | E | A | -2.7723 | |
| 25 | G | A | -2.3281 | |
| 26 | H | A | -2.1861 | |
| 27 | S | A | -1.3954 | |
| 28 | C | A | -0.8372 | |
| 29 | H | A | -0.5952 | |
| 30 | S | A | 0.0000 | |
| 31 | P | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | L | A | 0.0000 | |
| 35 | E | A | -1.1455 | |
| 36 | R | A | -1.8300 | |
| 37 | I | A | -0.9425 | |
| 38 | R | A | -1.1782 | |
| 39 | N | A | -1.6955 | |
| 40 | E | A | -1.5166 | |
| 41 | A | A | 0.0000 | |
| 42 | T | A | -1.1549 | |
| 43 | D | A | -2.3952 | |
| 44 | G | A | 0.0000 | |
| 45 | T | A | 0.0000 | |
| 46 | L | A | 0.0000 | |
| 47 | K | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Q | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | -0.2197 | |
| 52 | L | A | 0.0000 | |
| 53 | Q | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | K | A | -2.3313 | |
| 58 | T | A | -2.1050 | |
| 59 | D | A | -2.7354 | |
| 60 | D | A | -2.7428 | |
| 61 | S | A | -1.6923 | |
| 62 | H | A | -1.1954 | |
| 63 | D | A | -0.4952 | |
| 64 | W | A | 0.3301 | |
| 65 | T | A | -0.6572 | |
| 66 | K | A | -1.8805 | |
| 67 | L | A | 0.0000 | |
| 68 | R | A | 0.0000 | |
| 69 | Y | A | 0.0000 | |
| 70 | M | A | 0.0000 | |
| 71 | D | A | -1.0181 | |
| 72 | N | A | -1.4353 | |
| 73 | H | A | -0.6607 | |
| 74 | M | A | -0.1768 | |
| 75 | P | A | -0.6044 | |
| 76 | A | A | -1.1335 | |
| 77 | D | A | -2.5464 | |
| 78 | A | A | 0.0000 | |
| 79 | E | A | -2.6495 | |
| 80 | R | A | -1.5938 | |
| 81 | A | A | -0.7586 | |
| 82 | G | A | -0.8078 | |
| 83 | L | A | -0.1549 | |
| 84 | F | A | 0.5022 | |
| 85 | V | A | 0.0000 | |
| 86 | R | A | -1.2952 | |
| 87 | T | A | 0.0000 | |
| 88 | S | A | -1.2436 | |
| 89 | A | A | -0.8548 | |
| 90 | P | A | -0.7485 | |
| 91 | C | A | -0.9028 | |
| 92 | T | A | -0.3851 | |
| 93 | I | A | 0.0298 | |
| 94 | T | A | -0.3300 | |
| 95 | G | A | -0.3930 | |
| 96 | T | A | 0.0512 | |
| 97 | M | A | 0.1495 | |
| 98 | G | A | 0.0000 | |
| 99 | H | A | 0.0000 | |
| 100 | F | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | L | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | R | A | -2.0005 | |
| 105 | C | A | 0.0000 | |
| 106 | P | A | -2.2291 | |
| 107 | K | A | -2.9472 | |
| 108 | G | A | -2.6457 | |
| 109 | E | A | -2.8829 | |
| 110 | T | A | -1.6980 | |
| 111 | L | A | 0.0000 | |
| 112 | T | A | -0.7471 | |
| 113 | A | A | 0.0000 | |
| 114 | G | A | 0.0000 | |
| 115 | F | A | 0.0000 | |
| 116 | T | A | -0.8142 | |
| 117 | D | A | 0.0000 | |
| 118 | S | A | -1.8981 | |
| 119 | R | A | -2.0963 | |
| 120 | K | A | -1.9885 | |
| 121 | I | A | -0.3279 | |
| 122 | S | A | -0.3845 | |
| 123 | H | A | -0.1642 | |
| 124 | S | A | -0.1851 | |
| 125 | C | A | 0.0000 | |
| 126 | T | A | -0.7617 | |
| 127 | H | A | -0.9248 | |
| 128 | P | A | -1.1458 | |
| 129 | F | A | -1.2273 | |
| 130 | H | A | -2.3505 | |
| 131 | H | A | 0.0000 | |
| 132 | D | A | -2.4707 | |
| 133 | P | A | -1.5983 | |
| 134 | P | A | -0.1876 | |
| 135 | V | A | 0.8500 | |
| 136 | I | A | 0.2683 | |
| 137 | G | A | -0.1141 | |
| 138 | R | A | -0.4191 | |
| 139 | E | A | -1.3901 | |
| 140 | K | A | -1.7607 | |
| 141 | F | A | -1.3362 | |
| 142 | H | A | -1.9677 | |
| 143 | S | A | -1.8337 | |
| 144 | R | A | -2.7807 | |
| 145 | P | A | -2.4275 | |
| 146 | Q | A | -2.6697 | |
| 147 | H | A | -2.7010 | |
| 148 | G | A | -2.8403 | |
| 149 | K | A | -2.5622 | |
| 150 | E | A | -2.4778 | |
| 151 | L | A | -1.2762 | |
| 152 | P | A | -1.0453 | |
| 153 | C | A | 0.0000 | |
| 154 | S | A | -0.7959 | |
| 155 | T | A | -0.6901 | |
| 156 | Y | A | 0.0000 | |
| 157 | V | A | -0.2496 | |
| 158 | Q | A | -1.0496 | |
| 159 | S | A | -0.7567 | |
| 160 | T | A | -0.6257 | |
| 161 | A | A | -0.4849 | |
| 162 | A | A | -0.6654 | |
| 163 | T | A | -0.6421 | |
| 164 | T | A | -0.9619 | |
| 165 | E | A | -1.8997 | |
| 166 | E | A | -2.4154 | |
| 167 | I | A | -1.6627 | |
| 168 | E | A | -2.2500 | |
| 169 | V | A | 0.0000 | |
| 170 | H | A | -1.6620 | |
| 171 | M | A | -1.0450 | |
| 172 | P | A | 0.0000 | |
| 173 | P | A | -1.0643 | |
| 174 | D | A | -1.1357 | |
| 175 | T | A | -1.1024 | |
| 176 | P | A | -1.2144 | |
| 177 | D | A | -1.5560 | |
| 178 | R | A | -2.2556 | |
| 179 | T | A | -1.0873 | |
| 180 | L | A | 0.0000 | |
| 181 | M | A | -1.2551 | |
| 182 | S | A | -1.4587 | |
| 183 | Q | A | -2.3876 | |
| 184 | Q | A | -2.2075 | |
| 185 | S | A | -1.5827 | |
| 186 | G | A | -2.2846 | |
| 187 | N | A | -2.4620 | |
| 188 | V | A | 0.0000 | |
| 189 | K | A | -1.7486 | |
| 190 | I | A | 0.0000 | |
| 191 | T | A | -1.3360 | |
| 192 | V | A | 0.0000 | |
| 193 | N | A | -1.9310 | |
| 194 | G | A | -1.4957 | |
| 195 | Q | A | -1.1766 | |
| 196 | T | A | -0.5058 | |
| 197 | V | A | 0.0000 | |
| 198 | R | A | -1.2353 | |
| 199 | Y | A | 0.0000 | |
| 200 | K | A | -2.0223 | |
| 201 | C | A | 0.0000 | |
| 202 | N | A | -2.4971 | |
| 203 | C | A | -1.7093 | |
| 204 | G | A | -1.1303 | |
| 205 | G | A | -1.3974 | |
| 206 | S | A | -1.5891 | |
| 207 | N | A | -1.8687 | |
| 208 | E | A | -2.5845 | |
| 209 | G | A | -0.8866 | |
| 210 | L | A | 0.4602 | |
| 211 | T | A | 0.0000 | |
| 212 | T | A | -0.8104 | |
| 213 | T | A | -1.2129 | |
| 214 | D | A | -2.3709 | |
| 215 | K | A | -1.5404 | |
| 216 | V | A | -1.0211 | |
| 217 | I | A | 0.0000 | |
| 218 | N | A | -2.1411 | |
| 219 | N | A | -2.3283 | |
| 220 | C | A | 0.0000 | |
| 221 | K | A | -3.1613 | |
| 222 | V | A | -2.4651 | |
| 223 | D | A | -2.7933 | |
| 224 | Q | A | -2.2892 | |
| 225 | C | A | 0.0000 | |
| 226 | H | A | -2.1233 | |
| 227 | A | A | 0.0000 | |
| 228 | A | A | 0.0000 | |
| 229 | V | A | -0.3491 | |
| 230 | T | A | -0.9604 | |
| 231 | N | A | -1.3686 | |
| 232 | H | A | -1.8292 | |
| 233 | K | A | -2.4364 | |
| 234 | K | A | -1.8146 | |
| 235 | W | A | -0.6836 | |
| 236 | Q | A | 0.0000 | |
| 237 | Y | A | -0.4654 | |
| 238 | N | A | -1.2645 | |
| 239 | S | A | 0.0000 | |
| 240 | P | A | -0.7178 | |
| 241 | L | A | -0.2679 | |
| 242 | V | A | 0.0000 | |
| 243 | P | A | -1.2644 | |
| 244 | R | A | -2.2928 | |
| 245 | N | A | -2.3660 | |
| 246 | A | A | -1.4454 | |
| 247 | E | A | -2.0404 | |
| 248 | L | A | -0.8540 | |
| 249 | G | A | -1.9179 | |
| 250 | D | A | -3.2357 | |
| 251 | R | A | -3.8441 | |
| 252 | K | A | -3.6629 | |
| 253 | G | A | -2.6562 | |
| 254 | K | A | -3.1173 | |
| 255 | I | A | 0.0000 | |
| 256 | H | A | -1.8674 | |
| 257 | I | A | 0.0000 | |
| 258 | P | A | 0.0000 | |
| 259 | F | A | 0.0000 | |
| 260 | P | A | -0.1897 | |
| 261 | L | A | 0.0447 | |
| 262 | A | A | -0.3067 | |
| 263 | N | A | -1.1294 | |
| 264 | A | A | -0.9321 | |
| 265 | T | A | -1.2664 | |
| 266 | C | A | -2.0559 | |
| 267 | R | A | -3.4639 | |
| 268 | V | A | 0.0000 | |
| 269 | P | A | -2.7901 | |
| 270 | K | A | -3.0742 | |
| 271 | A | A | -2.4119 | |
| 272 | R | A | -3.0104 | |
| 273 | N | A | -2.1965 | |
| 274 | P | A | -0.7510 | |
| 275 | T | A | 0.0290 | |
| 276 | V | A | 0.6648 | |
| 277 | T | A | 0.8581 | |
| 278 | Y | A | 0.8142 | |
| 279 | G | A | -0.6994 | |
| 280 | K | A | -2.0967 | |
| 281 | N | A | -1.6254 | |
| 282 | Q | A | -0.6247 | |
| 283 | V | A | 0.0000 | |
| 284 | I | A | 1.1114 | |
| 285 | M | A | 0.0000 | |
| 286 | L | A | -0.2360 | |
| 287 | L | A | 0.0000 | |
| 288 | Y | A | -1.1919 | |
| 289 | P | A | -1.7358 | |
| 290 | D | A | -2.3407 | |
| 291 | H | A | -1.7074 | |
| 292 | P | A | -0.7836 | |
| 293 | T | A | 0.0000 | |
| 294 | L | A | 0.0000 | |
| 295 | L | A | 0.0000 | |
| 296 | S | A | -1.3023 | |
| 297 | Y | A | 0.0000 | |
| 298 | R | A | -1.5648 | |
| 299 | N | A | -1.8338 | |
| 300 | M | A | -1.8299 | |
| 301 | G | A | -2.8193 | |
| 302 | E | A | -3.3531 | |
| 303 | E | A | -3.1774 | |
| 304 | P | A | -2.2023 | |
| 305 | N | A | -1.9724 | |
| 306 | Y | A | -0.9639 | |
| 307 | Q | A | -2.1608 | |
| 308 | E | A | -2.8538 | |
| 309 | E | A | -2.0114 | |
| 310 | W | A | -0.4183 | |
| 311 | V | A | 0.0000 | |
| 312 | M | A | -0.3025 | |
| 313 | H | A | -2.0517 | |
| 314 | K | A | -2.9517 | |
| 315 | K | A | -2.6657 | |
| 316 | E | A | -1.7229 | |
| 317 | V | A | 0.0883 | |
| 318 | V | A | 1.5450 | |
| 319 | L | A | 0.7580 | |
| 320 | T | A | 0.0203 | |
| 321 | V | A | 0.0000 | |
| 322 | P | A | -0.7984 | |
| 323 | T | A | -0.8703 | |
| 324 | E | A | -2.1847 | |
| 325 | G | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | E | A | 0.0000 | |
| 328 | V | A | 0.0000 | |
| 329 | T | A | -0.9795 | |
| 330 | W | A | 0.0000 | |
| 331 | G | A | 0.0000 | |
| 332 | N | A | -1.6411 | |
| 333 | N | A | 0.0000 | |
| 334 | E | A | -2.1662 | |
| 335 | P | A | -1.3787 | |
| 336 | Y | A | -0.7709 | |
| 337 | K | A | -1.1735 | |
| 338 | Y | A | 0.0000 | |
| 339 | W | A | -0.0193 | |
| 340 | P | A | -0.8800 | |
| 341 | Q | A | -0.7982 | |
| 342 | L | A | 0.6596 | |
| 343 | S | A | 0.1982 | |
| 344 | T | A | -0.3871 | |
| 345 | N | A | -1.0562 | |
| 346 | G | A | -0.8001 | |
| 347 | T | A | -0.2384 | |
| 348 | A | A | 0.0045 | |
| 349 | H | A | -1.1041 | |
| 350 | G | A | -1.2400 | |
| 351 | H | A | -1.5188 | |
| 352 | P | A | -0.8169 | |
| 353 | H | A | -1.2546 | |
| 354 | E | A | -0.8638 | |
| 355 | I | A | 1.5268 | |
| 356 | I | A | 1.9006 | |
| 357 | L | A | 0.0000 | |
| 358 | Y | A | 2.1388 | |
| 359 | Y | A | 3.5080 | |
| 360 | Y | A | 2.3675 | |
| 361 | E | A | 0.2232 | |
| 362 | L | A | 2.1869 | |
| 363 | Y | A | 2.4496 | |
| 364 | P | A | 1.8930 | |
| 365 | T | A | 1.8837 | |
| 366 | M | A | 3.1687 | |
| 367 | T | A | 0.0000 | |
| 368 | V | A | 3.4042 | |
| 369 | V | A | 3.3617 | |
| 370 | V | A | 3.9672 | |
| 371 | V | A | 3.4903 | |
| 372 | S | A | 3.2461 | |
| 373 | V | A | 3.9936 | |
| 374 | A | A | 3.5238 | |
| 375 | T | A | 3.3855 | |
| 376 | F | A | 4.7816 | |
| 377 | I | A | 4.8533 | |
| 378 | L | A | 4.6318 | |
| 379 | L | A | 3.9734 | |
| 380 | S | A | 2.9304 | |
| 381 | M | A | 3.2483 | |
| 382 | V | A | 3.0367 | |
| 383 | G | A | 1.7407 | |
| 384 | M | A | 1.9584 | |
| 385 | A | A | 1.9266 | |
| 386 | A | A | 1.3886 | |
| 387 | G | A | 1.2132 | |
| 388 | M | A | 1.6543 | |
| 389 | C | A | 0.9433 | |
| 390 | I | A | 0.5984 | |
| 391 | C | A | -0.0726 | |
| 392 | A | A | -0.4905 | |
| 393 | R | A | -1.8193 | |
| 394 | R | A | -2.4314 | |
| 395 | R | A | -2.2431 | |
| 396 | C | A | -0.2892 | |
| 397 | I | A | 1.4307 | |
| 398 | T | A | 0.8191 | |
| 399 | P | A | 0.8099 | |
| 400 | Y | A | 1.0854 | |
| 401 | E | A | -0.6142 | |
| 402 | L | A | 0.8907 | |
| 403 | T | A | 0.3735 | |
| 404 | P | A | -0.3762 | |
| 405 | G | A | -0.3791 | |
| 406 | A | A | 0.1651 | |
| 407 | T | A | 0.9349 | |
| 408 | V | A | 2.4430 | |
| 409 | P | A | 2.3614 | |
| 410 | F | A | 3.7846 | |
| 411 | L | A | 4.2160 | |
| 412 | L | A | 4.1948 | |
| 413 | S | A | 3.5183 | |
| 414 | L | A | 4.1486 | |
| 415 | V | A | 4.2413 | |
| 416 | C | A | 3.0007 | |
| 417 | C | A | 2.6625 | |
| 418 | V | A | 2.3521 | |
| 419 | R | A | -0.6304 | |
| 420 | T | A | -0.3716 | |
| 421 | A | A | -1.0151 | |
| 422 | K | A | -1.8915 | |
| 423 | A | A | -0.7609 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine