| Chain sequence(s) |
H: QSLEESGGGPVKPGGTLTLTCKASGIDFSSFYYMCWVRQAPGKGLEWIACIVTDITGESYYATWAKGRFAISKTSSTTVTLQMTSLTAADTATYFCARGDTYGYGDTVYALNLWGPGTLVTVSS
L: GPVLTQTPPSASEPVGGTVTIKCQASQAIDEYLGWYQQKPGQRPKLLMYYASTLASGVPSRFKGSGSGTQFTLTISDLECADAATYYCQNYYVGSSTNYAFTFGGGTEVVVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | L | -0.0256 | |
| 2 | P | L | 0.1565 | |
| 3 | V | L | 1.1192 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.3844 | |
| 6 | Q | L | -0.9969 | |
| 7 | T | L | -0.9039 | |
| 8 | P | L | -0.8806 | |
| 9 | P | L | -1.1068 | |
| 10 | S | L | -0.8416 | |
| 11 | A | L | -0.3983 | |
| 12 | S | L | -0.2883 | |
| 13 | E | L | -0.5956 | |
| 14 | P | L | -0.5716 | |
| 15 | V | L | 0.2897 | |
| 16 | G | L | -1.0775 | |
| 17 | G | L | -1.0193 | |
| 18 | T | L | -0.8012 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5645 | |
| 21 | I | L | 0.0000 | |
| 22 | K | L | -1.6333 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -1.3690 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.4520 | |
| 27 | Q | L | -1.1086 | |
| 28 | A | L | -1.2596 | |
| 29 | I | L | -1.2094 | |
| 30 | D | L | -2.3458 | |
| 31 | E | L | -1.8333 | |
| 32 | Y | L | -0.5853 | |
| 33 | L | L | 0.0000 | |
| 34 | G | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.7255 | |
| 40 | P | L | -1.3089 | |
| 41 | G | L | -1.5846 | |
| 42 | Q | L | -2.4380 | |
| 43 | R | L | -2.3187 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -2.1786 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | M | L | 0.0000 | |
| 49 | Y | L | 0.1713 | |
| 50 | Y | L | -0.4452 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.6483 | |
| 53 | T | L | -0.0426 | |
| 54 | L | L | -0.0264 | |
| 55 | A | L | -0.2653 | |
| 56 | S | L | -0.3853 | |
| 57 | G | L | -0.5531 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -0.6079 | |
| 60 | S | L | -0.7718 | |
| 61 | R | L | -1.2933 | |
| 62 | F | L | 0.0000 | |
| 63 | K | L | -1.8639 | |
| 64 | G | L | 0.0000 | |
| 65 | S | L | -1.0755 | |
| 66 | G | L | -1.2972 | |
| 67 | S | L | -1.5162 | |
| 68 | G | L | -1.5739 | |
| 69 | T | L | -1.4440 | |
| 70 | Q | L | -1.7700 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -1.1672 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.8669 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.4603 | |
| 77 | D | L | -2.0786 | |
| 78 | L | L | 0.0000 | |
| 79 | E | L | -1.0149 | |
| 80 | C | L | 0.5488 | |
| 81 | A | L | 0.1759 | |
| 82 | D | L | 0.0000 | |
| 83 | A | L | -0.0456 | |
| 84 | A | L | 0.0000 | |
| 85 | T | L | -0.9008 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | N | L | 0.0000 | |
| 91 | Y | L | 0.0000 | |
| 92 | Y | L | 0.1721 | |
| 93 | V | L | 0.0912 | |
| 94 | G | L | -0.5670 | |
| 95 | S | L | -0.7126 | |
| 95A | S | L | -0.7107 | |
| 95B | T | L | -0.7050 | |
| 95C | N | L | -1.1692 | |
| 95D | Y | L | -0.1810 | |
| 95E | A | L | 0.0000 | |
| 96 | F | L | 0.0000 | |
| 97 | T | L | 0.1133 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -0.7963 | |
| 101 | G | L | -1.2381 | |
| 102 | T | L | 0.0000 | |
| 103 | E | L | -1.6237 | |
| 104 | V | L | 0.0000 | |
| 105 | V | L | 0.9666 | |
| 106 | V | L | 0.1336 | |
| 107 | K | L | -1.0579 | |
| 1 | Q | H | -1.5405 | |
| 2 | S | H | -1.4022 | |
| 3 | L | H | 0.0000 | |
| 4 | E | H | -2.3612 | |
| 5 | E | H | 0.0000 | |
| 6 | S | H | -0.8841 | |
| 7 | G | H | -0.4177 | |
| 8 | G | H | -0.0094 | |
| 9 | G | H | 0.0976 | |
| 10 | P | H | -0.4904 | |
| 11 | V | H | -0.9908 | |
| 12 | K | H | -2.0716 | |
| 13 | P | H | -1.4511 | |
| 14 | G | H | -1.1921 | |
| 15 | G | H | -0.9572 | |
| 16 | T | H | -0.6431 | |
| 17 | L | H | -0.4176 | |
| 18 | T | H | -0.4980 | |
| 19 | L | H | 0.0000 | |
| 20 | T | H | -0.9903 | |
| 21 | C | H | 0.0000 | |
| 22 | K | H | -1.8701 | |
| 23 | A | H | 0.0000 | |
| 24 | S | H | -1.3887 | |
| 25 | G | H | -1.1694 | |
| 26 | I | H | -0.5502 | |
| 27 | D | H | -0.1995 | |
| 28 | F | H | 1.6108 | |
| 29 | S | H | 0.7480 | |
| 30 | S | H | 0.8211 | |
| 31 | F | H | 1.9042 | |
| 32 | Y | H | 0.9857 | |
| 33 | Y | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 34A | C | H | 0.0000 | |
| 35 | W | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | R | H | 0.0000 | |
| 38 | Q | H | -0.8035 | |
| 39 | A | H | -0.8056 | |
| 40 | P | H | -0.9704 | |
| 41 | G | H | -1.5027 | |
| 42 | K | H | -2.2810 | |
| 43 | G | H | -1.4780 | |
| 44 | L | H | 0.0000 | |
| 45 | E | H | -1.0647 | |
| 46 | W | H | 0.0000 | |
| 47 | I | H | 0.0000 | |
| 48 | A | H | 0.0000 | |
| 49 | C | H | 0.0000 | |
| 50 | I | H | 0.0000 | |
| 51 | V | H | 0.0000 | |
| 51A | T | H | 0.7600 | |
| 51B | D | H | 1.0539 | |
| 52 | I | H | 1.7812 | |
| 53 | T | H | 0.5375 | |
| 54 | G | H | -0.0468 | |
| 55 | E | H | -0.4762 | |
| 56 | S | H | -0.4420 | |
| 57 | Y | H | 0.0000 | |
| 58 | Y | H | -0.3065 | |
| 59 | A | H | 0.0000 | |
| 60 | T | H | -0.3845 | |
| 61 | W | H | -0.1547 | |
| 62 | A | H | 0.0000 | |
| 63 | K | H | -1.8752 | |
| 64 | G | H | -1.4365 | |
| 65 | R | H | -1.3248 | |
| 66 | F | H | 0.0000 | |
| 67 | A | H | -0.8136 | |
| 68 | I | H | 0.0000 | |
| 69 | S | H | -0.6658 | |
| 70 | K | H | -0.6595 | |
| 71 | T | H | -0.5275 | |
| 72 | S | H | -0.6406 | |
| 73 | S | H | -0.4023 | |
| 74 | T | H | -0.5823 | |
| 75 | T | H | -0.9917 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.6782 | |
| 78 | L | H | 0.0000 | |
| 79 | Q | H | -0.9255 | |
| 80 | M | H | 0.0000 | |
| 81 | T | H | -0.6853 | |
| 81A | S | H | -0.8503 | |
| 81B | L | H | 0.0000 | |
| 82 | T | H | -0.6028 | |
| 83 | A | H | -0.3251 | |
| 84 | A | H | 0.0209 | |
| 85 | D | H | 0.0000 | |
| 86 | T | H | 0.1708 | |
| 87 | A | H | 0.0000 | |
| 88 | T | H | 0.3589 | |
| 89 | Y | H | 0.0000 | |
| 90 | F | H | 0.0000 | |
| 91 | C | H | 0.0000 | |
| 92 | A | H | 0.0000 | |
| 93 | R | H | 0.0000 | |
| 94 | G | H | 0.0000 | |
| 95 | D | H | 0.0813 | |
| 96 | T | H | 0.6959 | |
| 97 | Y | H | 0.8356 | |
| 98 | G | H | 0.3724 | |
| 99 | Y | H | 0.6513 | |
| 99A | G | H | -0.1710 | |
| 99B | D | H | -1.2975 | |
| 99C | T | H | -0.3976 | |
| 99D | V | H | -0.0914 | |
| 99E | Y | H | 0.0000 | |
| 99F | A | H | 0.0000 | |
| 99G | L | H | 0.0000 | |
| 100 | N | H | -0.9579 | |
| 101 | L | H | -0.8112 | |
| 102 | W | H | 0.0000 | |
| 103 | G | H | 0.0000 | |
| 104 | P | H | -1.1553 | |
| 105 | G | H | -0.6926 | |
| 106 | T | H | 0.1866 | |
| 107 | L | H | 1.2280 | |
| 108 | V | H | 0.0000 | |
| 109 | T | H | -0.1163 | |
| 110 | V | H | 0.0000 | |
| 111 | S | H | -1.0341 | |
| 112 | S | H | -1.0013 |