Project name: 1C8Z

Status: done

Started: 2026-03-30 05:48:42
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGYDFTHYGMNWVRQAPGKGLEWVGWINTYTGEPTYAADFKRRFTFSLDTSKSTAYLQMNSLRAEDTAVYYCAKYPYYYGTSHWYFDVWGQGTLVTVSS
L: DIQLTQSPSSLSASVGDRVTITCSASQDISNYLNWYQQKPGKAPKVLIYFTSSLHSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-2.8181
Maximal score value
2.4072
Average score
-0.4411
Total score value
-101.4436

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9221
2 V H -1.0065
3 Q H -0.8596
4 L H 0.0000
5 V H 1.0737
6 E H 0.0000
7 S H -0.2879
8 G H -0.6367
9 G H 0.0768
11 G H 0.7820
12 L H 1.3446
13 V H -0.0324
14 Q H -1.2960
15 P H -1.5121
16 G H -1.3783
17 G H -1.1090
18 S H -1.1345
19 L H -0.9436
20 R H -1.9583
21 L H 0.0000
22 S H -0.3102
23 C H 0.0000
24 A H 0.0821
25 A H 0.0000
26 S H -0.9388
27 G H -1.3681
28 Y H -1.2472
29 D H -1.8329
30 F H 0.0000
35 T H -0.4141
36 H H -0.8850
37 Y H -0.0993
38 G H -0.0726
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7544
45 A H -1.0946
46 P H -0.9731
47 G H -1.4166
48 K H -2.3987
49 G H -1.6658
50 L H 0.0000
51 E H -1.4067
52 W H 0.0000
53 V H 0.0000
54 G H 0.0000
55 W H -0.0112
56 I H 0.0000
57 N H -0.2187
58 T H 0.0000
59 Y H 0.8709
62 T H 0.1458
63 G H -0.3316
64 E H -0.8067
65 P H -0.6714
66 T H -0.1563
67 Y H -0.5293
68 A H 0.0000
69 A H -1.2686
70 D H -2.1442
71 F H 0.0000
72 K H -2.3744
74 R H -2.8181
75 R H -1.8723
76 F H 0.0000
77 T H -0.9444
78 F H 0.0000
79 S H -0.3836
80 L H -0.0153
81 D H -0.8379
82 T H -0.8423
83 S H -1.1365
84 K H -1.9141
85 S H -1.2619
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3996
89 L H 0.0000
90 Q H -1.1429
91 M H 0.0000
92 N H -1.4072
93 S H -1.3193
94 L H 0.0000
95 R H -1.9543
96 A H -1.5533
97 E H -2.1447
98 D H 0.0000
99 T H -0.3417
100 A H 0.0000
101 V H 0.6877
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 Y H 0.0000
108 P H 1.0519
109 Y H 2.1017
110 Y H 2.4072
111 Y H 1.9971
111A G H 0.6208
112B T H 0.6706
112A S H 0.8287
112 H H 0.9588
113 W H 0.8222
114 Y H 0.0000
115 F H 0.0000
116 D H -0.1106
117 V H -0.1190
118 W H -0.2866
119 G H 0.0000
120 Q H -1.2811
121 G H -0.3079
122 T H 0.0000
123 L H 1.6357
124 V H 0.0000
125 T H 0.3176
126 V H 0.0000
127 S H -0.6685
128 S H -0.5619
1 D L -1.8475
2 I L 0.0000
3 Q L -1.7816
4 L L 0.0000
5 T L -0.8229
6 Q L 0.0000
7 S L -0.4740
8 P L -0.5191
9 S L -0.8286
10 S L -0.8790
11 L L -0.6319
12 S L -0.8476
13 A L 0.0000
14 S L -0.6236
15 V L 0.2555
16 G L -0.6485
17 D L -1.4996
18 R L -2.1859
19 V L 0.0000
20 T L -0.6262
21 I L 0.0000
22 T L -0.5220
23 C L 0.0000
24 S L -1.3020
25 A L 0.0000
26 S L -1.7650
27 Q L -2.3958
28 D L -2.5428
29 I L 0.0000
36 S L -0.9258
37 N L -0.3893
38 Y L 0.5012
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.0697
45 K L -1.4575
46 P L -1.0616
47 G L -1.6927
48 K L -2.5533
49 A L -1.5088
50 P L 0.0000
51 K L -1.1735
52 V L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.7242
56 F L 0.9098
57 T L 0.0000
65 S L 0.0295
66 S L 0.3487
67 L L 0.4595
68 H L -0.0645
69 S L -0.3532
70 G L -0.4841
71 V L -0.2766
72 P L -0.3296
74 S L -0.3969
75 R L -0.7407
76 F L 0.0000
77 S L -0.3096
78 G L -0.1231
79 S L -0.6282
80 G L -0.9078
83 S L -1.0749
84 G L -1.5793
85 T L -1.8882
86 D L -2.1132
87 F L 0.0000
88 T L -0.5825
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.4052
93 S L -1.1093
94 L L 0.0000
95 Q L -0.5709
96 P L -0.8519
97 E L -1.4722
98 D L 0.0000
99 F L 0.2010
100 A L 0.0000
101 T L -0.7079
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 S L -0.2055
109 T L 0.3330
114 V L 1.0063
115 P L 0.2426
116 W L 0.0000
117 T L -0.6306
118 F L -0.5112
119 G L 0.0000
120 Q L -1.6968
121 G L 0.0000
122 T L 0.0000
123 K L -1.4217
124 L L 0.0000
125 E L -0.8626
126 I L -0.4724
127 K L -1.4919
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Laboratory of Theory of Biopolymers 2018