| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGYDFTHYGMNWVRQAPGKGLEWVGWINTYTGEPTYAADFKRRFTFSLDTSKSTAYLQMNSLRAEDTAVYYCAKYPYYYGTSHWYFDVWGQGTLVTVSS
L: DIQLTQSPSSLSASVGDRVTITCSASQDISNYLNWYQQKPGKAPKVLIYFTSSLHSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9221 | |
| 2 | V | H | -1.0065 | |
| 3 | Q | H | -0.8596 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0737 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2879 | |
| 8 | G | H | -0.6367 | |
| 9 | G | H | 0.0768 | |
| 11 | G | H | 0.7820 | |
| 12 | L | H | 1.3446 | |
| 13 | V | H | -0.0324 | |
| 14 | Q | H | -1.2960 | |
| 15 | P | H | -1.5121 | |
| 16 | G | H | -1.3783 | |
| 17 | G | H | -1.1090 | |
| 18 | S | H | -1.1345 | |
| 19 | L | H | -0.9436 | |
| 20 | R | H | -1.9583 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3102 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0821 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9388 | |
| 27 | G | H | -1.3681 | |
| 28 | Y | H | -1.2472 | |
| 29 | D | H | -1.8329 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.4141 | |
| 36 | H | H | -0.8850 | |
| 37 | Y | H | -0.0993 | |
| 38 | G | H | -0.0726 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7544 | |
| 45 | A | H | -1.0946 | |
| 46 | P | H | -0.9731 | |
| 47 | G | H | -1.4166 | |
| 48 | K | H | -2.3987 | |
| 49 | G | H | -1.6658 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.4067 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.0112 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.2187 | |
| 58 | T | H | 0.0000 | |
| 59 | Y | H | 0.8709 | |
| 62 | T | H | 0.1458 | |
| 63 | G | H | -0.3316 | |
| 64 | E | H | -0.8067 | |
| 65 | P | H | -0.6714 | |
| 66 | T | H | -0.1563 | |
| 67 | Y | H | -0.5293 | |
| 68 | A | H | 0.0000 | |
| 69 | A | H | -1.2686 | |
| 70 | D | H | -2.1442 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.3744 | |
| 74 | R | H | -2.8181 | |
| 75 | R | H | -1.8723 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9444 | |
| 78 | F | H | 0.0000 | |
| 79 | S | H | -0.3836 | |
| 80 | L | H | -0.0153 | |
| 81 | D | H | -0.8379 | |
| 82 | T | H | -0.8423 | |
| 83 | S | H | -1.1365 | |
| 84 | K | H | -1.9141 | |
| 85 | S | H | -1.2619 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3996 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1429 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.4072 | |
| 93 | S | H | -1.3193 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -1.9543 | |
| 96 | A | H | -1.5533 | |
| 97 | E | H | -2.1447 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3417 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6877 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | Y | H | 0.0000 | |
| 108 | P | H | 1.0519 | |
| 109 | Y | H | 2.1017 | |
| 110 | Y | H | 2.4072 | |
| 111 | Y | H | 1.9971 | |
| 111A | G | H | 0.6208 | |
| 112B | T | H | 0.6706 | |
| 112A | S | H | 0.8287 | |
| 112 | H | H | 0.9588 | |
| 113 | W | H | 0.8222 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1106 | |
| 117 | V | H | -0.1190 | |
| 118 | W | H | -0.2866 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2811 | |
| 121 | G | H | -0.3079 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.6357 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3176 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6685 | |
| 128 | S | H | -0.5619 | |
| 1 | D | L | -1.8475 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.7816 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.8229 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4740 | |
| 8 | P | L | -0.5191 | |
| 9 | S | L | -0.8286 | |
| 10 | S | L | -0.8790 | |
| 11 | L | L | -0.6319 | |
| 12 | S | L | -0.8476 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6236 | |
| 15 | V | L | 0.2555 | |
| 16 | G | L | -0.6485 | |
| 17 | D | L | -1.4996 | |
| 18 | R | L | -2.1859 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6262 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5220 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.3020 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.7650 | |
| 27 | Q | L | -2.3958 | |
| 28 | D | L | -2.5428 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.9258 | |
| 37 | N | L | -0.3893 | |
| 38 | Y | L | 0.5012 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0697 | |
| 45 | K | L | -1.4575 | |
| 46 | P | L | -1.0616 | |
| 47 | G | L | -1.6927 | |
| 48 | K | L | -2.5533 | |
| 49 | A | L | -1.5088 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1735 | |
| 52 | V | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.7242 | |
| 56 | F | L | 0.9098 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | 0.0295 | |
| 66 | S | L | 0.3487 | |
| 67 | L | L | 0.4595 | |
| 68 | H | L | -0.0645 | |
| 69 | S | L | -0.3532 | |
| 70 | G | L | -0.4841 | |
| 71 | V | L | -0.2766 | |
| 72 | P | L | -0.3296 | |
| 74 | S | L | -0.3969 | |
| 75 | R | L | -0.7407 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3096 | |
| 78 | G | L | -0.1231 | |
| 79 | S | L | -0.6282 | |
| 80 | G | L | -0.9078 | |
| 83 | S | L | -1.0749 | |
| 84 | G | L | -1.5793 | |
| 85 | T | L | -1.8882 | |
| 86 | D | L | -2.1132 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.5825 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4052 | |
| 93 | S | L | -1.1093 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5709 | |
| 96 | P | L | -0.8519 | |
| 97 | E | L | -1.4722 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.2010 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7079 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | S | L | -0.2055 | |
| 109 | T | L | 0.3330 | |
| 114 | V | L | 1.0063 | |
| 115 | P | L | 0.2426 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.6306 | |
| 118 | F | L | -0.5112 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6968 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4217 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.8626 | |
| 126 | I | L | -0.4724 | |
| 127 | K | L | -1.4919 |