| Chain sequence(s) |
A: MGEVQLVESGGGSVQAGGSLRLSCAASGVSNTDMIMIWFRQAPGKEREGVLAAIYKNSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAAIAFNGHNHPILTIYWGQGTQVTVGGGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4679 | |
| 2 | G | A | -0.9712 | |
| 3 | E | A | -1.9690 | |
| 4 | V | A | -0.8636 | |
| 5 | Q | A | -0.9614 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.2389 | |
| 8 | E | A | 0.1983 | |
| 9 | S | A | -0.6547 | |
| 10 | G | A | -1.2808 | |
| 11 | G | A | -1.1967 | |
| 12 | G | A | -0.9432 | |
| 13 | S | A | -0.7341 | |
| 14 | V | A | -0.8473 | |
| 15 | Q | A | -1.8343 | |
| 16 | A | A | -1.8997 | |
| 17 | G | A | -1.4035 | |
| 18 | G | A | -1.0383 | |
| 19 | S | A | -1.1742 | |
| 20 | L | A | -1.1443 | |
| 21 | R | A | -2.1848 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4689 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.0666 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.7883 | |
| 28 | G | A | -0.8434 | |
| 29 | V | A | -0.4047 | |
| 30 | S | A | -0.9654 | |
| 31 | N | A | 0.0000 | |
| 32 | T | A | -1.6792 | |
| 33 | D | A | -1.5997 | |
| 34 | M | A | 0.0000 | |
| 35 | I | A | 0.3047 | |
| 36 | M | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.1344 | |
| 40 | R | A | -0.8573 | |
| 41 | Q | A | -1.6926 | |
| 42 | A | A | -1.8269 | |
| 43 | P | A | -1.5679 | |
| 44 | G | A | -1.9341 | |
| 45 | K | A | -3.2031 | |
| 46 | E | A | -3.3438 | |
| 47 | R | A | -2.3600 | |
| 48 | E | A | -1.7014 | |
| 49 | G | A | -0.7894 | |
| 50 | V | A | 0.4431 | |
| 51 | L | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.7899 | |
| 54 | I | A | 0.0000 | |
| 55 | Y | A | -0.7457 | |
| 56 | K | A | -2.3002 | |
| 57 | N | A | -2.0665 | |
| 58 | S | A | -0.8667 | |
| 59 | T | A | 0.1260 | |
| 60 | Y | A | 1.0559 | |
| 61 | Y | A | -0.1292 | |
| 62 | A | A | -0.9894 | |
| 63 | D | A | -2.3355 | |
| 64 | S | A | -1.8201 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.4600 | |
| 67 | G | A | -1.7779 | |
| 68 | R | A | -1.4699 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7326 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.7002 | |
| 73 | Q | A | -1.5616 | |
| 74 | D | A | -1.9410 | |
| 75 | N | A | -2.2957 | |
| 76 | A | A | -1.7105 | |
| 77 | K | A | -2.4478 | |
| 78 | N | A | -1.7842 | |
| 79 | T | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.2760 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.3724 | |
| 86 | S | A | -1.1530 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -2.3711 | |
| 89 | P | A | -2.0362 | |
| 90 | E | A | -2.3921 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -1.1281 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | -0.3999 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0909 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 1.5758 | |
| 101 | A | A | 1.0812 | |
| 102 | F | A | 0.9999 | |
| 103 | N | A | -0.5523 | |
| 104 | G | A | -1.4129 | |
| 105 | H | A | -1.9834 | |
| 106 | N | A | -2.3265 | |
| 107 | H | A | -1.4603 | |
| 108 | P | A | -0.1593 | |
| 109 | I | A | 1.7879 | |
| 110 | L | A | 2.5151 | |
| 111 | T | A | 2.0128 | |
| 112 | I | A | 2.5025 | |
| 113 | Y | A | 1.2275 | |
| 114 | W | A | 1.1863 | |
| 115 | G | A | 0.2177 | |
| 116 | Q | A | -0.7246 | |
| 117 | G | A | -0.4232 | |
| 118 | T | A | 0.0000 | |
| 119 | Q | A | -1.2801 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -1.0192 | |
| 122 | V | A | 0.0000 | |
| 123 | G | A | -1.4981 | |
| 124 | G | A | -1.6087 | |
| 125 | G | A | -1.3842 | |
| 126 | S | A | -0.7228 |