| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKFGDTENPTEPQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRCGPDGVPLPDDPPPSPLYVKPPPDSPTAVRPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9427 | |
| 2 | L | A | 1.9638 | |
| 3 | P | A | 0.6489 | |
| 4 | P | A | 0.3716 | |
| 5 | T | A | 0.1214 | |
| 6 | T | A | 0.1317 | |
| 7 | P | A | 0.1760 | |
| 8 | V | A | 1.2346 | |
| 9 | A | A | 0.0796 | |
| 10 | K | A | -1.0305 | |
| 11 | V | A | -0.1814 | |
| 12 | Q | A | -1.4173 | |
| 13 | S | A | -1.5668 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4419 | |
| 16 | E | A | -2.4492 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4528 | |
| 20 | P | A | 0.1244 | |
| 21 | T | A | 0.1589 | |
| 22 | S | A | -0.0950 | |
| 23 | L | A | 0.0966 | |
| 24 | F | A | -0.0207 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2832 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8961 | |
| 31 | R | A | -2.6828 | |
| 32 | L | A | -0.8018 | |
| 33 | L | A | 1.1625 | |
| 34 | T | A | 1.3796 | |
| 35 | V | A | 1.8620 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1605 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5855 | |
| 40 | K | A | -1.5117 | |
| 41 | D | A | -0.6615 | |
| 42 | I | A | 0.9980 | |
| 43 | I | A | 1.2680 | |
| 44 | K | A | -1.0527 | |
| 45 | N | A | -1.8762 | |
| 46 | G | A | -1.1827 | |
| 47 | K | A | -0.8972 | |
| 48 | V | A | 1.5282 | |
| 49 | V | A | 2.0949 | |
| 50 | V | A | 1.3308 | |
| 51 | P | A | 0.5381 | |
| 52 | K | A | -0.5671 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1611 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4054 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2682 | |
| 70 | K | A | -1.7886 | |
| 71 | F | A | -0.6350 | |
| 72 | A | A | -0.5787 | |
| 73 | L | A | -0.8676 | |
| 74 | P | A | -1.2731 | |
| 75 | Q | A | -2.5046 | |
| 76 | K | A | -3.1081 | |
| 77 | D | A | -2.9901 | |
| 78 | F | A | -1.6696 | |
| 79 | Y | A | -1.8836 | |
| 80 | D | A | -2.6777 | |
| 81 | P | A | -2.3011 | |
| 82 | E | A | -3.0450 | |
| 83 | K | A | -3.3955 | |
| 84 | E | A | -2.4580 | |
| 85 | R | A | -1.2880 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6384 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9690 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3618 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7012 | |
| 99 | G | A | -0.5423 | |
| 100 | P | A | -0.4144 | |
| 101 | L | A | 0.0244 | |
| 102 | G | A | -0.2360 | |
| 103 | K | A | -0.6730 | |
| 104 | G | A | -0.4944 | |
| 105 | S | A | -0.5236 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1305 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4152 | |
| 110 | L | A | 0.2954 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0685 | |
| 113 | K | A | -0.2363 | |
| 114 | F | A | -1.2553 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5689 | |
| 117 | T | A | -0.8644 | |
| 118 | E | A | -1.8161 | |
| 119 | N | A | -2.2355 | |
| 120 | P | A | -2.1027 | |
| 121 | T | A | -1.7751 | |
| 122 | E | A | -2.6557 | |
| 123 | P | A | -1.8977 | |
| 124 | Q | A | -2.5279 | |
| 125 | H | A | -2.3956 | |
| 126 | E | A | -2.6833 | |
| 127 | G | A | -2.2068 | |
| 128 | A | A | -1.5133 | |
| 129 | D | A | -2.3919 | |
| 130 | D | A | -2.0110 | |
| 131 | R | A | -1.0818 | |
| 132 | V | A | 0.2262 | |
| 133 | A | A | 0.4346 | |
| 134 | F | A | 0.2723 | |
| 135 | S | A | -0.0836 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4933 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2241 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5601 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1953 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1445 | |
| 157 | D | A | 0.3030 | |
| 158 | I | A | 0.8374 | |
| 159 | A | A | 0.1195 | |
| 160 | E | A | -1.4784 | |
| 161 | P | A | -0.2279 | |
| 162 | C | A | 0.1876 | |
| 163 | P | A | -0.1674 | |
| 164 | G | A | -0.0681 | |
| 165 | L | A | 0.6099 | |
| 166 | P | A | -0.1021 | |
| 167 | P | A | -0.3331 | |
| 168 | G | A | -0.4205 | |
| 169 | A | A | 0.3089 | |
| 170 | C | A | 1.1071 | |
| 171 | P | A | 0.5600 | |
| 172 | P | A | 0.7969 | |
| 173 | I | A | 2.0612 | |
| 174 | Q | A | 0.8734 | |
| 175 | L | A | 1.4682 | |
| 176 | V | A | 0.8471 | |
| 177 | N | A | -0.2963 | |
| 178 | S | A | 0.0255 | |
| 179 | V | A | 0.4331 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3900 | |
| 182 | D | A | 0.0820 | |
| 183 | G | A | -0.1558 | |
| 184 | D | A | -0.5312 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0726 | |
| 190 | F | A | 0.0438 | |
| 191 | G | A | -0.0961 | |
| 192 | N | A | -0.2579 | |
| 193 | M | A | -0.1241 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3847 | |
| 197 | E | A | -2.6132 | |
| 198 | L | A | -1.2179 | |
| 199 | Q | A | -2.5531 | |
| 200 | Q | A | -3.3068 | |
| 201 | D | A | -3.5784 | |
| 202 | R | A | -3.3368 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1978 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3583 | |
| 211 | S | A | -1.8905 | |
| 212 | T | A | -1.4394 | |
| 213 | R | A | -2.0916 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1461 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3483 | |
| 220 | L | A | 0.6183 | |
| 221 | K | A | -1.0834 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8070 | |
| 224 | N | A | -1.4847 | |
| 225 | E | A | -1.2256 | |
| 226 | A | A | -0.6104 | |
| 227 | Y | A | -0.3776 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6551 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0679 | |
| 234 | F | A | 0.2457 | |
| 235 | G | A | -0.8248 | |
| 236 | R | A | -2.4565 | |
| 237 | R | A | -2.5485 | |
| 238 | E | A | -1.5378 | |
| 239 | Q | A | 0.0978 | |
| 240 | V | A | 1.5867 | |
| 241 | Y | A | 1.2459 | |
| 242 | A | A | 0.4029 | |
| 243 | R | A | -0.5834 | |
| 244 | H | A | -0.7653 | |
| 245 | F | A | 0.1634 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4732 | |
| 249 | C | A | -0.9725 | |
| 250 | G | A | -0.9696 | |
| 251 | P | A | -0.5578 | |
| 252 | D | A | -0.3526 | |
| 253 | G | A | 0.0919 | |
| 254 | V | A | 1.3946 | |
| 255 | P | A | 0.2078 | |
| 256 | L | A | 0.2364 | |
| 257 | P | A | -0.6364 | |
| 258 | D | A | -2.0518 | |
| 259 | D | A | -1.6432 | |
| 260 | P | A | -1.2602 | |
| 261 | P | A | -0.6791 | |
| 262 | P | A | -0.2437 | |
| 263 | S | A | -0.2305 | |
| 264 | P | A | 0.5455 | |
| 265 | L | A | 1.4497 | |
| 266 | Y | A | 1.1527 | |
| 267 | V | A | 1.1452 | |
| 268 | K | A | -0.6138 | |
| 269 | P | A | -0.5348 | |
| 270 | P | A | -1.0699 | |
| 271 | P | A | -1.2460 | |
| 272 | D | A | -1.8810 | |
| 273 | S | A | -0.9387 | |
| 274 | P | A | -0.7228 | |
| 275 | T | A | -0.4006 | |
| 276 | A | A | -0.2716 | |
| 277 | V | A | 0.8194 | |
| 278 | R | A | -0.1946 | |
| 279 | P | A | -0.7960 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.2668 | |
| 282 | D | A | -0.0815 | |
| 283 | Y | A | 1.1214 | |
| 284 | F | A | 0.8185 | |
| 285 | G | A | 0.3481 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9604 | |
| 291 | L | A | 1.6217 | |
| 292 | V | A | 0.6274 | |
| 293 | S | A | -0.1605 | |
| 294 | S | A | -0.9618 | |
| 295 | D | A | -1.8423 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0966 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6412 | |
| 301 | R | A | -1.8560 | |
| 302 | P | A | -0.9770 | |
| 303 | F | A | -0.1950 | |
| 304 | W | A | -0.5593 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0789 | |
| 307 | R | A | -2.8346 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2701 | |
| 310 | G | A | -1.2299 | |
| 311 | N | A | -1.2850 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8362 | |
| 319 | N | A | -0.8618 | |
| 320 | E | A | -1.0463 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3559 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0869 | |
| 333 | N | A | 0.5844 | |
| 334 | F | A | 1.8136 | |
| 335 | T | A | 0.9038 | |
| 336 | I | A | 0.4704 | |
| 337 | S | A | -0.9336 | |
| 338 | Q | A | -1.7216 | |
| 339 | Q | A | -1.3401 | |
| 340 | L | A | 0.6677 | |
| 341 | C | A | 0.2907 | |
| 342 | T | A | -0.5028 | |
| 343 | P | A | -0.9708 | |
| 344 | E | A | -2.3458 | |
| 345 | E | A | -2.6328 | |
| 346 | N | A | -1.5630 | |
| 347 | V | A | 0.4374 | |
| 348 | Y | A | 0.8906 | |
| 349 | D | A | -0.2146 | |
| 350 | P | A | -0.3602 | |
| 351 | S | A | -0.2932 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7712 | |
| 354 | K | A | -1.7476 | |
| 355 | N | A | -1.7481 | |
| 356 | Y | A | -0.0649 | |
| 357 | L | A | 0.6722 | |
| 358 | R | A | 1.0224 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4123 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0791 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0501 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6877 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3030 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3172 | |
| 376 | L | A | -1.7179 | |
| 377 | D | A | -2.0073 | |
| 378 | P | A | -1.0445 | |
| 379 | G | A | -1.0172 | |
| 380 | V | A | -0.9371 | |
| 381 | L | A | -0.5351 | |
| 382 | A | A | -0.6575 | |
| 383 | H | A | -0.8100 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4089 | |
| 386 | T | A | -0.5519 | |
| 387 | M | A | -0.3024 | |
| 388 | N | A | -0.8640 | |
| 389 | P | A | -1.2492 | |
| 390 | T | A | -1.4523 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4349 | |
| 393 | E | A | -2.7768 | |
| 394 | N | A | -2.3794 | |
| 395 | W | A | -1.3622 | |
| 396 | N | A | -1.0694 | |
| 397 | L | A | -0.1875 | |
| 398 | G | A | 0.5368 | |
| 399 | F | A | 2.4251 | |
| 400 | V | A | 1.8454 | |
| 401 | P | A | 0.0513 | |
| 402 | P | A | -1.8204 | |
| 403 | K | A | -3.3352 | |
| 404 | E | A | -3.7994 | |
| 405 | R | A | -3.9577 | |
| 406 | E | A | -3.8080 | |
| 407 | D | A | -2.8779 | |
| 408 | P | A | -1.7694 | |
| 409 | Y | A | -0.9796 | |
| 410 | K | A | -2.1181 | |
| 411 | G | A | -0.6326 | |
| 412 | L | A | 0.6816 | |
| 413 | I | A | 1.5899 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3986 | |
| 416 | E | A | -1.7028 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9541 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0512 | |
| 421 | E | A | -2.7763 | |
| 422 | R | A | -2.5536 | |
| 423 | F | A | -1.2713 | |
| 424 | S | A | -1.4586 | |
| 425 | Q | A | -1.7408 | |
| 426 | D | A | -2.8944 | |
| 427 | L | A | -1.9905 | |
| 428 | D | A | -2.7861 | |
| 429 | Q | A | -2.6215 | |
| 430 | F | A | -1.4293 | |
| 431 | A | A | -0.9127 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6380 | |
| 435 | K | A | -0.7301 | |
| 436 | F | A | 0.1321 | |
| 437 | L | A | 1.0111 | |
| 438 | Y | A | 0.8142 | |
| 439 | Q | A | -0.2822 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine