| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGEDDRVAFSWDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPAAPPPSPLYVPPPPTSPLAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9490 | |
| 2 | L | A | 1.9751 | |
| 3 | P | A | 0.6553 | |
| 4 | P | A | 0.3474 | |
| 5 | T | A | 0.1068 | |
| 6 | T | A | 0.1318 | |
| 7 | P | A | 0.1637 | |
| 8 | V | A | 1.2083 | |
| 9 | A | A | 0.0232 | |
| 10 | K | A | -1.1498 | |
| 11 | V | A | -0.4074 | |
| 12 | Q | A | -1.5350 | |
| 13 | S | A | -1.6133 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4384 | |
| 16 | E | A | -2.4487 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4510 | |
| 20 | P | A | 0.1048 | |
| 21 | T | A | 0.1153 | |
| 22 | S | A | -0.1685 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0893 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1475 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6949 | |
| 31 | R | A | -2.5861 | |
| 32 | L | A | -0.7399 | |
| 33 | L | A | 1.2406 | |
| 34 | T | A | 1.6521 | |
| 35 | V | A | 2.0132 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2170 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6060 | |
| 40 | K | A | -1.6321 | |
| 41 | D | A | -0.9307 | |
| 42 | I | A | 0.8205 | |
| 43 | V | A | 1.0157 | |
| 44 | K | A | -1.1865 | |
| 45 | N | A | -1.9271 | |
| 46 | G | A | -1.2352 | |
| 47 | K | A | -0.9480 | |
| 48 | V | A | 1.4969 | |
| 49 | V | A | 2.0640 | |
| 50 | V | A | 1.2991 | |
| 51 | P | A | 0.4887 | |
| 52 | K | A | -0.6158 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1071 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4874 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2625 | |
| 70 | K | A | -1.8096 | |
| 71 | F | A | -0.6648 | |
| 72 | A | A | -0.5818 | |
| 73 | L | A | -0.9404 | |
| 74 | P | A | -1.2682 | |
| 75 | Q | A | -2.4809 | |
| 76 | K | A | -3.0989 | |
| 77 | D | A | -2.9947 | |
| 78 | F | A | -1.6462 | |
| 79 | Y | A | -1.9295 | |
| 80 | D | A | -2.7781 | |
| 81 | P | A | -2.3571 | |
| 82 | E | A | -3.0741 | |
| 83 | K | A | -3.4466 | |
| 84 | E | A | -2.5112 | |
| 85 | R | A | -1.3140 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6260 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9622 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3085 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7275 | |
| 99 | G | A | -0.5201 | |
| 100 | P | A | -0.3823 | |
| 101 | L | A | 0.0933 | |
| 102 | G | A | -0.1750 | |
| 103 | K | A | -0.5897 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4347 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1562 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4283 | |
| 110 | L | A | 0.3071 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1697 | |
| 113 | K | A | -0.6913 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4620 | |
| 117 | T | A | -1.2989 | |
| 118 | E | A | -2.7435 | |
| 119 | N | A | -2.4274 | |
| 120 | P | A | -1.5348 | |
| 121 | T | A | -0.7826 | |
| 122 | A | A | -0.3278 | |
| 123 | P | A | -0.2700 | |
| 124 | V | A | -0.4414 | |
| 125 | H | A | -1.7098 | |
| 126 | E | A | -3.2137 | |
| 127 | G | A | -3.1789 | |
| 128 | E | A | -3.5041 | |
| 129 | D | A | -3.4182 | |
| 130 | D | A | -2.5327 | |
| 131 | R | A | -1.3520 | |
| 132 | V | A | 0.2377 | |
| 133 | A | A | 0.4543 | |
| 134 | F | A | 0.2968 | |
| 135 | S | A | -0.0626 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | -0.6567 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5755 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2578 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1168 | |
| 157 | D | A | 0.3666 | |
| 158 | I | A | 0.8616 | |
| 159 | A | A | 0.1209 | |
| 160 | E | A | -1.4795 | |
| 161 | P | A | -0.2488 | |
| 162 | C | A | 0.1779 | |
| 163 | P | A | -0.1637 | |
| 164 | G | A | -0.0651 | |
| 165 | L | A | 0.6155 | |
| 166 | P | A | -0.0991 | |
| 167 | P | A | -0.3344 | |
| 168 | G | A | -0.4107 | |
| 169 | A | A | -0.0050 | |
| 170 | C | A | 0.7584 | |
| 171 | P | A | 0.5500 | |
| 172 | P | A | 0.6842 | |
| 173 | I | A | 2.0371 | |
| 174 | Q | A | 0.8474 | |
| 175 | L | A | 1.4434 | |
| 176 | V | A | 0.8264 | |
| 177 | N | A | -0.3339 | |
| 178 | S | A | -0.0039 | |
| 179 | V | A | 0.3742 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3638 | |
| 182 | D | A | 0.0781 | |
| 183 | G | A | -0.1594 | |
| 184 | D | A | -0.5829 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4553 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1465 | |
| 190 | F | A | 0.0489 | |
| 191 | G | A | -0.1121 | |
| 192 | N | A | -0.3131 | |
| 193 | M | A | -0.1570 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3914 | |
| 197 | E | A | -2.5820 | |
| 198 | L | A | -1.2011 | |
| 199 | Q | A | -2.5273 | |
| 200 | Q | A | -3.3451 | |
| 201 | D | A | -3.6022 | |
| 202 | R | A | -3.3399 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2086 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3732 | |
| 211 | S | A | -1.8943 | |
| 212 | T | A | -1.4549 | |
| 213 | R | A | -2.1581 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2133 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2651 | |
| 220 | L | A | 0.4533 | |
| 221 | K | A | -1.4054 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -1.0023 | |
| 224 | N | A | -1.7349 | |
| 225 | E | A | -1.3573 | |
| 226 | A | A | -0.6734 | |
| 227 | Y | A | -0.4523 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7289 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1412 | |
| 234 | F | A | 0.0377 | |
| 235 | G | A | -0.9078 | |
| 236 | R | A | -2.6551 | |
| 237 | R | A | -2.8845 | |
| 238 | E | A | -2.1138 | |
| 239 | Q | A | -0.0946 | |
| 240 | V | A | 1.5738 | |
| 241 | Y | A | 1.2629 | |
| 242 | A | A | 0.1840 | |
| 243 | R | A | -1.2730 | |
| 244 | H | A | -1.1850 | |
| 245 | F | A | -0.3118 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.3939 | |
| 248 | R | A | -0.7714 | |
| 249 | S | A | -1.7740 | |
| 250 | G | A | -1.4789 | |
| 251 | P | A | -1.1367 | |
| 252 | E | A | -1.3234 | |
| 253 | G | A | -1.2469 | |
| 254 | H | A | -1.4376 | |
| 255 | P | A | -0.8790 | |
| 256 | L | A | 0.3208 | |
| 257 | P | A | 0.0851 | |
| 258 | A | A | 0.2470 | |
| 259 | A | A | 0.2799 | |
| 260 | P | A | -0.2245 | |
| 261 | P | A | -0.1269 | |
| 262 | P | A | 0.0591 | |
| 263 | S | A | 0.5605 | |
| 264 | P | A | 0.7059 | |
| 265 | L | A | 1.9014 | |
| 266 | Y | A | 1.7158 | |
| 267 | V | A | 1.9329 | |
| 268 | P | A | 1.0670 | |
| 269 | P | A | 0.8007 | |
| 270 | P | A | -0.0340 | |
| 271 | P | A | -0.0236 | |
| 272 | T | A | -0.1117 | |
| 273 | S | A | 0.4562 | |
| 274 | P | A | 0.8496 | |
| 275 | L | A | 2.0605 | |
| 276 | A | A | 1.5480 | |
| 277 | V | A | 2.4782 | |
| 278 | L | A | 1.8022 | |
| 279 | P | A | 0.3509 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3356 | |
| 282 | D | A | -0.9455 | |
| 283 | Y | A | 0.7950 | |
| 284 | F | A | 0.6434 | |
| 285 | G | A | 0.0856 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9783 | |
| 291 | L | A | 1.6630 | |
| 292 | V | A | 0.6911 | |
| 293 | S | A | -0.1311 | |
| 294 | S | A | -0.9510 | |
| 295 | D | A | -1.8383 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1215 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6264 | |
| 301 | R | A | -1.8766 | |
| 302 | P | A | -0.9616 | |
| 303 | F | A | -0.1781 | |
| 304 | W | A | -0.5107 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0766 | |
| 307 | R | A | -2.9223 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7843 | |
| 310 | G | A | -1.4264 | |
| 311 | N | A | -1.3932 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9714 | |
| 319 | N | A | -0.8951 | |
| 320 | E | A | -1.0536 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3027 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1183 | |
| 333 | N | A | 0.4247 | |
| 334 | F | A | 1.4569 | |
| 335 | T | A | 0.7228 | |
| 336 | I | A | 0.3801 | |
| 337 | S | A | -0.8641 | |
| 338 | Q | A | -1.4860 | |
| 339 | Q | A | -0.8853 | |
| 340 | L | A | 0.7921 | |
| 341 | C | A | 0.4348 | |
| 342 | T | A | 0.1459 | |
| 343 | P | A | -0.2827 | |
| 344 | A | A | 0.1741 | |
| 345 | P | A | 0.2023 | |
| 346 | N | A | -0.2838 | |
| 347 | V | A | 1.5573 | |
| 348 | Y | A | 1.4772 | |
| 349 | D | A | 0.0992 | |
| 350 | P | A | -0.3068 | |
| 351 | S | A | -0.2516 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5128 | |
| 354 | K | A | -1.6463 | |
| 355 | N | A | -1.6930 | |
| 356 | Y | A | -0.1022 | |
| 357 | L | A | 0.5656 | |
| 358 | R | A | 0.9060 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4875 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0031 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8903 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6630 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2834 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3296 | |
| 376 | L | A | -1.7558 | |
| 377 | D | A | -2.0469 | |
| 378 | P | A | -1.0702 | |
| 379 | G | A | -1.0303 | |
| 380 | V | A | -0.9408 | |
| 381 | L | A | -0.5469 | |
| 382 | A | A | -0.6642 | |
| 383 | H | A | -0.8524 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4022 | |
| 386 | T | A | -0.5764 | |
| 387 | M | A | -0.3324 | |
| 388 | N | A | -0.8716 | |
| 389 | P | A | -1.2998 | |
| 390 | T | A | -1.6239 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5660 | |
| 393 | E | A | -3.0074 | |
| 394 | N | A | -2.8634 | |
| 395 | W | A | -1.5490 | |
| 396 | N | A | -1.0962 | |
| 397 | L | A | -0.1601 | |
| 398 | G | A | 0.5651 | |
| 399 | F | A | 2.4521 | |
| 400 | V | A | 1.8846 | |
| 401 | P | A | 0.0771 | |
| 402 | P | A | -2.0065 | |
| 403 | K | A | -3.5655 | |
| 404 | E | A | -4.1024 | |
| 405 | R | A | -4.6499 | |
| 406 | E | A | -4.1117 | |
| 407 | D | A | -3.0333 | |
| 408 | P | A | -1.8562 | |
| 409 | Y | A | -0.9932 | |
| 410 | K | A | -2.0990 | |
| 411 | G | A | -0.6396 | |
| 412 | L | A | 0.6605 | |
| 413 | I | A | 1.5827 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3809 | |
| 416 | E | A | -1.6246 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8271 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8882 | |
| 421 | E | A | -2.4960 | |
| 422 | R | A | -2.0572 | |
| 423 | F | A | -1.0153 | |
| 424 | S | A | -1.3118 | |
| 425 | Q | A | -1.8062 | |
| 426 | D | A | -2.8995 | |
| 427 | L | A | -2.0176 | |
| 428 | D | A | -2.8352 | |
| 429 | Q | A | -2.6380 | |
| 430 | F | A | -1.4664 | |
| 431 | A | A | -0.9184 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6111 | |
| 435 | K | A | -0.7329 | |
| 436 | F | A | 0.1551 | |
| 437 | L | A | 1.0277 | |
| 438 | Y | A | 0.8208 | |
| 439 | Q | A | -0.2682 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine