| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.2508 | |
| 2 | A | A | -1.7130 | |
| 3 | E | A | -2.5900 | |
| 4 | F | A | -1.6730 | |
| 5 | R | A | -2.9199 | |
| 6 | H | A | -2.6902 | |
| 7 | D | A | -2.8431 | |
| 8 | S | A | -1.7761 | |
| 9 | G | A | 0.0000 | |
| 10 | Y | A | -0.6784 | |
| 11 | E | A | -0.8117 | |
| 12 | V | A | -0.3693 | |
| 13 | H | A | -0.9640 | |
| 14 | H | A | -1.5647 | |
| 15 | Q | A | -2.0451 | |
| 16 | K | A | -1.3299 | |
| 17 | L | A | 0.0000 | |
| 18 | V | A | 0.2231 | |
| 19 | F | A | 0.0000 | |
| 20 | F | A | -1.2185 | |
| 21 | A | A | -1.5406 | |
| 22 | E | A | -2.4851 | |
| 23 | D | A | -2.0816 | |
| 24 | V | A | 0.0000 | |
| 25 | G | A | -1.1379 | |
| 26 | S | A | -1.3775 | |
| 27 | N | A | -1.3816 | |
| 28 | K | A | -0.7309 | |
| 29 | G | A | -0.4752 | |
| 30 | A | A | -0.3177 | |
| 31 | I | A | 0.0000 | |
| 32 | I | A | 0.8384 | |
| 33 | G | A | 0.4587 | |
| 34 | L | A | 1.0376 | |
| 35 | M | A | 0.0000 | |
| 36 | V | A | 1.7212 | |
| 37 | G | A | 0.8980 | |
| 38 | G | A | 1.4477 | |
| 39 | V | A | 1.9079 | |
| 40 | V | A | 2.5964 | |
| 41 | I | A | 1.7186 | |
| 42 | A | A | 1.3689 | |
| 1 | D | B | -2.2014 | |
| 2 | A | B | -1.6230 | |
| 3 | E | B | -2.3596 | |
| 4 | F | B | -1.1918 | |
| 5 | R | B | -2.6029 | |
| 6 | H | B | -2.4431 | |
| 7 | D | B | -2.7369 | |
| 8 | S | B | -1.7066 | |
| 9 | G | B | 0.0000 | |
| 10 | Y | B | -0.8129 | |
| 11 | E | B | -0.6432 | |
| 12 | V | B | -0.2948 | |
| 13 | H | B | -1.0259 | |
| 14 | H | B | -1.6397 | |
| 15 | Q | B | -2.2494 | |
| 16 | K | B | -1.5386 | |
| 17 | L | B | 0.0000 | |
| 18 | V | B | 0.0000 | |
| 19 | F | B | 0.0000 | |
| 20 | F | B | -1.0762 | |
| 21 | A | B | -1.6067 | |
| 22 | E | B | -2.4096 | |
| 23 | D | B | -2.1516 | |
| 24 | V | B | 0.0000 | |
| 25 | G | B | -1.0110 | |
| 26 | S | B | -1.3725 | |
| 27 | N | B | -1.3087 | |
| 28 | K | B | -0.7146 | |
| 29 | G | B | -0.5783 | |
| 30 | A | B | -0.2363 | |
| 31 | I | B | 0.0000 | |
| 32 | I | B | 0.9077 | |
| 33 | G | B | 0.6893 | |
| 34 | L | B | 1.4505 | |
| 35 | M | B | 0.0000 | |
| 36 | V | B | 2.1409 | |
| 37 | G | B | 1.0836 | |
| 38 | G | B | 1.5957 | |
| 39 | V | B | 2.8389 | |
| 40 | V | B | 2.7857 | |
| 41 | I | B | 1.2130 | |
| 42 | A | B | 0.9511 |