| Chain sequence(s) |
A: FFKGHFF
C: FFKGHFF B: FFKGHFF D: FFKGHFF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:50)
[INFO] Main: Simulation completed successfully. (00:02:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 5.0090 | |
| 2 | F | A | 4.5161 | |
| 3 | K | A | 2.1613 | |
| 4 | G | A | 1.4550 | |
| 5 | H | A | 0.0558 | |
| 6 | F | A | 3.5580 | |
| 7 | F | A | 3.8444 | |
| 1 | F | B | 4.7134 | |
| 2 | F | B | 4.4275 | |
| 3 | K | B | 1.2124 | |
| 4 | G | B | 0.8165 | |
| 5 | H | B | 0.0374 | |
| 6 | F | B | 3.9992 | |
| 7 | F | B | 5.9741 | |
| 1 | F | C | 6.1348 | |
| 2 | F | C | 4.5975 | |
| 3 | K | C | 0.6074 | |
| 4 | G | C | 1.2130 | |
| 5 | H | C | 0.4296 | |
| 6 | F | C | 3.3784 | |
| 7 | F | C | 3.8626 | |
| 1 | F | D | 4.7260 | |
| 2 | F | D | 4.1126 | |
| 3 | K | D | 1.5491 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | 0.6287 | |
| 6 | F | D | 3.8096 | |
| 7 | F | D | 4.8614 |