Project name: d469ae9383740dd

Status: done

Started: 2026-02-11 07:02:21
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Chain sequence(s) A: GSGHKFF
C: GSGHKFF
B: GSGHKFF
E: GSGHKFF
D: GSGHKFF
G: GSGHKFF
F: GSGHKFF
I: GSGHKFF
H: GSGHKFF
K: GSGHKFF
J: GSGHKFF
M: GSGHKFF
L: GSGHKFF
O: GSGHKFF
N: GSGHKFF
Q: GSGHKFF
P: GSGHKFF
S: GSGHKFF
R: GSGHKFF
T: GSGHKFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:36)
Show buried residues

Minimal score value
-1.6171
Maximal score value
3.4911
Average score
-0.0311
Total score value
-4.3586

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.0675
2 S A -0.8193
3 G A -0.9661
4 H A 0.0000
5 K A -0.1288
6 F A 1.6104
7 F A 3.4911
1 G B -1.0747
2 S B -0.8811
3 G B -1.0275
4 H B 0.0000
5 K B -0.4509
6 F B 0.0000
7 F B 3.3245
1 G C -1.0880
2 S C -0.9238
3 G C -1.3384
4 H C 0.0000
5 K C -0.7868
6 F C 0.0000
7 F C 2.6254
1 G D -1.0699
2 S D -0.8260
3 G D -0.9566
4 H D 0.0000
5 K D -0.1542
6 F D 0.0000
7 F D 3.4147
1 G E -1.0803
2 S E -0.8399
3 G E -0.9453
4 H E 0.0000
5 K E -0.1831
6 F E 0.0000
7 F E 3.1855
1 G F -1.0788
2 S F -0.8474
3 G F -0.9515
4 H F 0.0000
5 K F -0.1224
6 F F 0.0000
7 F F 3.1911
1 G G -1.0939
2 S G -0.8482
3 G G -0.9714
4 H G 0.0000
5 K G -0.3125
6 F G 0.0000
7 F G 3.1939
1 G H -1.0964
2 S H -1.0110
3 G H -1.3827
4 H H 0.0000
5 K H -0.3312
6 F H 0.0000
7 F H 3.2126
1 G I -0.9037
2 S I -1.0226
3 G I -1.4527
4 H I -1.4044
5 K I -0.8550
6 F I 1.7876
7 F I 3.0530
1 G J -0.8887
2 S J -0.9579
3 G J -1.2812
4 H J -1.3499
5 K J -0.9006
6 F J 1.0471
7 F J 2.6465
1 G K -1.0769
2 S K -0.9676
3 G K -1.2844
4 H K 0.0000
5 K K -0.5469
6 F K 0.0000
7 F K 2.9549
1 G L -1.0339
2 S L -0.8544
3 G L -1.0178
4 H L 0.0000
5 K L -0.3968
6 F L 0.0000
7 F L 3.3185
1 G M -1.0132
2 S M -0.8257
3 G M -1.0127
4 H M 0.0000
5 K M -0.3247
6 F M 0.0000
7 F M 3.3549
1 G N -0.9607
2 S N -0.7734
3 G N -1.0012
4 H N 0.0000
5 K N -0.3567
6 F N 0.0000
7 F N 3.1026
1 G O -0.4802
2 S O -0.0463
3 G O -0.1166
4 H O 0.0000
5 K O -0.3043
6 F O 0.0000
7 F O 2.3874
1 G P 0.1688
2 S P 0.9427
3 G P 0.9217
4 H P 0.0794
5 K P -0.2291
6 F P 0.0000
7 F P 1.3341
1 G Q -0.3609
2 S Q -0.0936
3 G Q -0.1325
4 H Q -0.5306
5 K Q -0.5712
6 F Q 0.0000
7 F Q 2.4825
1 G R -0.9289
2 S R -0.8285
3 G R -1.4073
4 H R -1.4066
5 K R -1.4215
6 F R 0.5630
7 F R 2.3209
1 G S -1.0243
2 S S -0.9513
3 G S -1.1590
4 H S 0.0000
5 K S -0.7926
6 F S 0.0000
7 F S 2.9006
1 G T -0.9542
2 S T -0.9210
3 G T -1.5059
4 H T -1.6171
5 K T -1.3830
6 F T 0.7604
7 F T 2.5514
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Laboratory of Theory of Biopolymers 2018