Project name: query_structure

Status: done

Started: 2026-03-16 20:44:32
Settings
Chain sequence(s) A: PTYCVCHQVSFGDMIACDNENCQGGEWFHYTCVGLTPETRFKGKWYCPTCRLL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:20)
Show buried residues

Minimal score value
-3.2413
Maximal score value
1.9535
Average score
-0.566
Total score value
-29.9968

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
206 P A -0.1453
207 T A -0.0478
208 Y A 0.2205
209 C A 0.0000
210 V A 1.2402
211 C A 0.6490
212 H A -0.4938
213 Q A -0.1227
214 V A 1.0855
215 S A 0.7957
216 F A 1.2763
217 G A -0.4270
218 D A -1.2828
219 M A -0.3720
220 I A 0.0000
221 A A -0.6083
222 C A 0.0000
223 D A -2.4223
224 N A -2.5363
225 E A -3.2413
226 N A -2.9155
227 C A -2.3384
228 Q A -2.1618
229 G A -0.8983
230 G A -0.7854
231 E A -1.8835
232 W A 0.0196
233 F A 0.0000
234 H A 0.0000
235 Y A 0.0000
236 T A -0.1222
237 C A 0.7896
238 V A 0.4546
239 G A -0.2080
240 L A -0.3678
241 T A -0.8660
242 P A -1.7388
243 E A -2.4853
244 T A -1.9496
245 R A -2.3062
246 F A -1.1642
247 K A -2.2036
248 G A -2.1413
249 K A -2.2075
250 W A 0.0000
251 Y A -0.4308
252 C A 0.0000
253 P A 0.3888
254 T A 0.3749
255 C A 0.0000
256 R A -0.0866
257 L A 1.7154
258 L A 1.9535
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Laboratory of Theory of Biopolymers 2018