| Chain sequence(s) |
A: PTYCVCHQVSFGDMIACDNENCQGGEWFHYTCVGLTPETRFKGKWYCPTCRLL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 206 | P | A | -0.1453 | |
| 207 | T | A | -0.0478 | |
| 208 | Y | A | 0.2205 | |
| 209 | C | A | 0.0000 | |
| 210 | V | A | 1.2402 | |
| 211 | C | A | 0.6490 | |
| 212 | H | A | -0.4938 | |
| 213 | Q | A | -0.1227 | |
| 214 | V | A | 1.0855 | |
| 215 | S | A | 0.7957 | |
| 216 | F | A | 1.2763 | |
| 217 | G | A | -0.4270 | |
| 218 | D | A | -1.2828 | |
| 219 | M | A | -0.3720 | |
| 220 | I | A | 0.0000 | |
| 221 | A | A | -0.6083 | |
| 222 | C | A | 0.0000 | |
| 223 | D | A | -2.4223 | |
| 224 | N | A | -2.5363 | |
| 225 | E | A | -3.2413 | |
| 226 | N | A | -2.9155 | |
| 227 | C | A | -2.3384 | |
| 228 | Q | A | -2.1618 | |
| 229 | G | A | -0.8983 | |
| 230 | G | A | -0.7854 | |
| 231 | E | A | -1.8835 | |
| 232 | W | A | 0.0196 | |
| 233 | F | A | 0.0000 | |
| 234 | H | A | 0.0000 | |
| 235 | Y | A | 0.0000 | |
| 236 | T | A | -0.1222 | |
| 237 | C | A | 0.7896 | |
| 238 | V | A | 0.4546 | |
| 239 | G | A | -0.2080 | |
| 240 | L | A | -0.3678 | |
| 241 | T | A | -0.8660 | |
| 242 | P | A | -1.7388 | |
| 243 | E | A | -2.4853 | |
| 244 | T | A | -1.9496 | |
| 245 | R | A | -2.3062 | |
| 246 | F | A | -1.1642 | |
| 247 | K | A | -2.2036 | |
| 248 | G | A | -2.1413 | |
| 249 | K | A | -2.2075 | |
| 250 | W | A | 0.0000 | |
| 251 | Y | A | -0.4308 | |
| 252 | C | A | 0.0000 | |
| 253 | P | A | 0.3888 | |
| 254 | T | A | 0.3749 | |
| 255 | C | A | 0.0000 | |
| 256 | R | A | -0.0866 | |
| 257 | L | A | 1.7154 | |
| 258 | L | A | 1.9535 |