| Chain sequence(s) |
A: GIVEQCCTSICSLYQLENYCN
B: FVNQHLCGSHLVVEALYLVCGERRGFFYTPKA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.3084 | |
| 2 | I | A | 0.0000 | |
| 3 | V | A | -1.1232 | |
| 4 | E | A | -1.7635 | |
| 5 | Q | A | -1.1342 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -0.5915 | |
| 8 | T | A | -0.4906 | |
| 9 | S | A | -0.1042 | |
| 10 | I | A | 0.5879 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | 0.6629 | |
| 13 | L | A | 1.2864 | |
| 14 | Y | A | 1.1282 | |
| 15 | Q | A | -0.1174 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -1.1423 | |
| 18 | N | A | -1.3781 | |
| 19 | Y | A | -0.5438 | |
| 20 | C | A | -1.0683 | |
| 21 | N | A | -1.8024 | |
| 1 | F | B | 1.3016 | |
| 2 | V | B | 0.7202 | |
| 3 | N | B | -0.4726 | |
| 4 | Q | B | -0.6861 | |
| 5 | H | B | -0.7163 | |
| 6 | L | B | 0.0000 | |
| 7 | C | B | -0.7857 | |
| 8 | G | B | -0.6080 | |
| 9 | S | B | -1.0840 | |
| 10 | H | B | -1.2940 | |
| 11 | L | B | 0.0000 | |
| 12 | V | B | 0.1396 | |
| 13 | E | B | -0.9422 | |
| 14 | A | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | Y | B | 1.0862 | |
| 17 | L | B | 1.3164 | |
| 18 | V | B | 0.5721 | |
| 19 | C | B | 0.0000 | |
| 20 | G | B | -0.9127 | |
| 21 | E | B | -2.3379 | |
| 22 | R | B | -2.2895 | |
| 23 | G | B | -0.6876 | |
| 24 | F | B | 0.2810 | |
| 25 | F | B | 1.5867 | |
| 26 | Y | B | 1.2660 | |
| 27 | T | B | 0.0708 | |
| 28 | P | B | -0.8487 | |
| 29 | K | B | -1.6706 | |
| 30 | A | B | -1.0115 |